FFCP PHASE1:Hg19::chr2:74735290..74735299,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84759 | |EntrezGene=84759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17615 | |HGNC=17615 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSM1 | |UniProt=Q9BSM1 | ||
|association_with_transcript=407bp_to_ENST00000233630_5end | |association_with_transcript=407bp_to_ENST00000233630_5end | ||
|cluster_id=chr2:74735290..74735299,- | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_11_at_PCGF1_5end | |description=CAGE_peak_11_at_PCGF1_5end | ||
|id=chr2:74735290..74735299,- | |id=chr2:74735290..74735299,- | ||
|ontology_enrichment_celltype=CL:0002582!1.16e-10!3;CL:0000594!3.47e-10!3;CL:0000333!1.54e-07!41;CL:0002620!1.58e-07!23;CL:0000188!1.91e-07!9 | |ontology_enrichment_celltype=CL:0002582!1.16e-10!3;CL:0000594!3.47e-10!3;CL:0000333!1.54e-07!41;CL:0002620!1.58e-07!23;CL:0000188!1.91e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.64e-89;5!CL:0002321;1.81e-30;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.75e-11,41;CL:0000133,3.25e-08,59;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000221;1.21e-07;72 | |||
|ontology_enrichment_disease=DOID:169!5.88e-12!6;DOID:171!2.36e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;2.58e-74;6!DOID:171;4.18e-45;10!DOID:3095;3.99e-21;22!DOID:2994;3.99e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.58e-74,6;DOID:171,4.18e-45,10;DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!3.02e-14!5;UBERON:0002410!3.02e-14!5;UBERON:0000010!4.01e-08!8;UBERON:0002336!4.07e-08!1;UBERON:0001018!4.07e-08!1;UBERON:0002473!4.07e-08!1;UBERON:0005340!4.07e-08!1;UBERON:0002316!4.07e-08!1;UBERON:0003544!4.07e-08!1;UBERON:0001020!4.07e-08!1;UBERON:0005970!4.07e-08!1;UBERON:0002437!4.07e-08!1;UBERON:0002199!5.89e-07!45;UBERON:0002416!5.89e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;6.64e-89;5!UBERON:0002410;6.64e-89;5!UBERON:0000010;5.60e-50;8!UBERON:0001052;1.29e-13;4!UBERON:0004907;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.64e-89,5;UBERON:0002410,6.64e-89,5;UBERON:0000010,5.60e-50,8;UBERON:0001052,1.29e-13,4;UBERON:0004907,3.60e-11,5 | |||
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|short_description=p11@PCGF1 | |short_description=p11@PCGF1 | ||
}} | }} |
Latest revision as of 11:36, 18 September 2015
Short description: | p11@PCGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PCGF1_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 407bp_to_ENST00000233630_5end |
EntrezGene: | PCGF1 |
HGNC: | 17615 |
UniProt: | Q9BSM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.75e-11 | 41 |
neurectodermal cell | 3.25e-08 | 59 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.64e-89 | 5 |
autonomic nervous system | 6.64e-89 | 5 |
peripheral nervous system | 5.60e-50 | 8 |
rectum | 1.29e-13 | 4 |
lower digestive tract | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.58e-74 | 6 |
neuroectodermal tumor | 4.18e-45 | 10 |
germ cell and embryonal cancer | 3.99e-21 | 22 |
germ cell cancer | 3.99e-21 | 22 |