FFCP PHASE1:Hg19::chr19:49118307..49118336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49118307..49118336,- | |||
|coexpression_cluster_id=C1341 | |||
|description=CAGE_peak_at_chr19:49118307..49118336,- | |description=CAGE_peak_at_chr19:49118307..49118336,- | ||
|id=chr19:49118307..49118336,- | |id=chr19:49118307..49118336,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;6.05e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.79e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.05e-10;1!UBERON:0004874;6.05e-10;1!UBERON:0009117;2.69e-08;10!UBERON:0005564;2.69e-08;10 | |||
|ontology_enrichment_disease=DOID:299!3.44e-13!25;DOID:305!7.51e-13!106;DOID:0050687!6.41e-09!143 | |ontology_enrichment_disease=DOID:299!3.44e-13!25;DOID:305!7.51e-13!106;DOID:0050687!6.41e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:299;5.10e-12;25!DOID:3111;6.05e-10;1!DOID:2152;6.05e-10;1!DOID:3603;6.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,6.24e-12,25;DOID:3111,4.85e-10,1;DOID:3603,4.85e-10,1;DOID:2152,5.79e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;8.39e-38;17!UBERON:0005409;2.48e-29;22!UBERON:0002108;4.56e-28;4!UBERON:0004921;5.61e-26;33!UBERON:0000059;5.41e-13;11!UBERON:0002114;2.00e-12;2!UBERON:0005795;6.05e-10;1!UBERON:0000989;6.05e-10;1!UBERON:0001736;6.05e-10;1!UBERON:0004911;6.05e-10;1!UBERON:0004913;6.05e-10;1!UBERON:0008811;6.05e-10;1!UBERON:0003703;6.05e-10;1!UBERON:0001174;6.05e-10;1!UBERON:0004914;6.05e-10;1!UBERON:0001052;1.52e-09;4!UBERON:0001555;3.42e-09;54!UBERON:0001007;1.68e-08;81!UBERON:0004907;8.31e-08;5!UBERON:0001044;9.14e-07;6!UBERON:0003293;9.14e-07;6!UBERON:0003294;9.14e-07;6!UBERON:0010047;9.14e-07;6!UBERON:0003408;9.14e-07;6!UBERON:0000167;9.14e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.97e-38,17;UBERON:0002108,8.29e-28,4;UBERON:0005409,6.54e-26,25;UBERON:0000059,3.39e-13,11;UBERON:0002114,2.25e-12,2;UBERON:0004921,3.92e-10,118;UBERON:0000989,4.44e-10,1;UBERON:0008811,4.44e-10,1;UBERON:0006258,4.44e-10,1;UBERON:0005876,4.44e-10,1;UBERON:0004874,4.44e-10,1;UBERON:0004911,5.79e-10,1;UBERON:0001736,7.55e-10,1;UBERON:0006298,7.55e-10,1;UBERON:0001052,8.26e-10,4;UBERON:0004913,1.17e-09,1;UBERON:0003703,1.17e-09,1;UBERON:0001174,1.17e-09,1;UBERON:0004914,1.17e-09,1;UBERON:0001007,2.88e-09,145;UBERON:0001555,2.88e-09,145;UBERON:0007026,2.88e-09,145;UBERON:0004119,3.53e-08,160;UBERON:0000925,3.53e-08,160;UBERON:0006595,3.53e-08,160;UBERON:0004907,5.12e-08,5 | |||
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| ||
|short_description=p@chr19:49118307..49118336,- | |short_description=p@chr19:49118307..49118336,- | ||
}} | }} |
Latest revision as of 15:46, 27 July 2015
Short description: | p@chr19:49118307..49118336, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49118307..49118336, - |
Coexpression cluster: | C1341_smallcell_small_gall_colon_temporal_signet_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.79e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.97e-38 | 17 |
small intestine | 8.29e-28 | 4 |
gastrointestinal system | 6.54e-26 | 25 |
large intestine | 3.39e-13 | 11 |
duodenum | 2.25e-12 | 2 |
subdivision of digestive tract | 3.92e-10 | 118 |
penis | 4.44e-10 | 1 |
intromittent organ | 4.44e-10 | 1 |
lateral plate mesenchyme | 4.44e-10 | 1 |
undifferentiated genital tubercle | 4.44e-10 | 1 |
somatopleure | 4.44e-10 | 1 |
epithelium of female gonad | 5.79e-10 | 1 |
submandibular gland | 7.55e-10 | 1 |
submandibular gland primordium | 7.55e-10 | 1 |
rectum | 8.26e-10 | 4 |
hepatopancreatic ampulla | 1.17e-09 | 1 |
extrahepatic bile duct | 1.17e-09 | 1 |
common bile duct | 1.17e-09 | 1 |
duodenal papilla | 1.17e-09 | 1 |
digestive system | 2.88e-09 | 145 |
digestive tract | 2.88e-09 | 145 |
primitive gut | 2.88e-09 | 145 |
endoderm-derived structure | 3.53e-08 | 160 |
endoderm | 3.53e-08 | 160 |
presumptive endoderm | 3.53e-08 | 160 |
lower digestive tract | 5.12e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.24e-12 | 25 |
cystadenocarcinoma | 4.85e-10 | 1 |
mucinous cystadenocarcinoma | 4.85e-10 | 1 |
ovary epithelial cancer | 5.79e-10 | 1 |