FFCP PHASE1:Hg19::chr3:154798079..154798088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=0bp_to_NM_007289,uc003fae.1_5end | |association_with_transcript=0bp_to_NM_007289,uc003fae.1_5end | ||
|cluster_id=chr3:154798079..154798088,+ | |||
|coexpression_cluster_id=C1513 | |||
|description=CAGE_peak_16_at_MME_5end | |description=CAGE_peak_16_at_MME_5end | ||
|id=chr3:154798079..154798088,+ | |id=chr3:154798079..154798088,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.04e-14!180;CL:0000057!2.57e-11!75;CL:0000136!9.72e-10!15;CL:0002620!7.89e-08!23;CL:0000048!8.60e-07!430 | |ontology_enrichment_celltype=CL:0000055!6.04e-14!180;CL:0000057!2.57e-11!75;CL:0000136!9.72e-10!15;CL:0002620!7.89e-08!23;CL:0000048!8.60e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.98e-16;13!CL:0000775;6.60e-09;3!CL:0000094;6.33e-08;8!CL:0002521;7.84e-08;3!CL:0002504;1.99e-07;3!CL:1000279;1.99e-07;3!CL:1000280;1.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.72e-14,15;CL:0000775,6.50e-09,3;CL:0002521,5.97e-08,3;CL:0000094,6.44e-08,8;CL:0002504,1.44e-07,3;CL:1000279,1.44e-07,3;CL:1000280,1.44e-07,3;CL:0000048,2.13e-07,427;CL:0000723,4.32e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.00e-09!83;UBERON:0002329!2.00e-09!83;UBERON:0003077!2.00e-09!83;UBERON:0003059!2.00e-09!83;UBERON:0007282!2.00e-09!83;UBERON:0009618!2.00e-09!83;UBERON:0007285!2.00e-09!83;UBERON:0004290!6.33e-09!70;UBERON:0002199!7.56e-08!45;UBERON:0002416!7.56e-08!45;UBERON:0002100!1.13e-07!216;UBERON:0003102!1.27e-07!95;UBERON:0005256!3.04e-07!143;UBERON:0000486!3.99e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;7.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,5.97e-08,3;UBERON:0002199,1.53e-07,46;UBERON:0002416,1.53e-07,46 | |||
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| ||
|short_description=p16@MME | |short_description=p16@MME | ||
}} | }} |
Latest revision as of 04:50, 16 September 2015
Short description: | p16@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MME_5end |
Coexpression cluster: | C1513_Smooth_Neutrophils_Eosinophils_Pancreatic_Mesenchymal_Skeletal_mesenchymal |
Association with transcript: | 0bp_to_NM_007289, uc003fae.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.72e-14 | 15 |
neutrophil | 6.50e-09 | 3 |
subcutaneous fat cell | 5.97e-08 | 3 |
granulocyte | 6.44e-08 | 8 |
enteric smooth muscle cell | 1.44e-07 | 3 |
smooth muscle cell of large intestine | 1.44e-07 | 3 |
smooth muscle cell of colon | 1.44e-07 | 3 |
multi fate stem cell | 2.13e-07 | 427 |
somatic stem cell | 4.32e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 5.97e-08 | 3 |
integument | 1.53e-07 | 46 |
integumental system | 1.53e-07 | 46 |