FFCP PHASE1:Hg19::chr12:31909925..31909947,-: Difference between revisions
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|id=chr12:31909925..31909947,-
|short_description=p@chr12:31909925..31909947,-
|description=CAGE_peak_at_chr12:31909925..31909947,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:31909925..31909947,- | |||
|description=CAGE_peak_at_chr12:31909925..31909947,- | |||
|id=chr12:31909925..31909947,- | |||
|ontology_enrichment_celltype=CL:0002057!2.91e-26!42;CL:0000860!7.50e-24!45;CL:0002009!9.42e-17!65;CL:0002194!3.26e-16!63;CL:0000576!3.26e-16!63;CL:0000040!3.26e-16!63;CL:0000559!3.26e-16!63;CL:0000557!1.58e-14!71;CL:0000839!1.13e-13!70;CL:0002076!4.89e-13!43;CL:0000766!9.05e-13!76;CL:0000223!2.52e-12!59;CL:0000066!2.07e-11!254;CL:0000763!1.16e-07!112;CL:0000049!1.16e-07!112;CL:0002149!3.23e-07!6;CL:0002255!3.23e-07!6;CL:0000063!4.01e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.34e-29;33!CL:0002057;2.34e-29;33!CL:0000473;1.17e-20;39!CL:0000234;1.17e-20;39!CL:0000576;2.32e-11;48!CL:0000766;8.83e-08;69!CL:0002149;2.92e-07;6!CL:0002255;2.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.36e-23,42;CL:0002057,3.36e-23,42;CL:0000473,7.94e-20,48;CL:0000234,7.94e-20,48;CL:0002009,1.82e-16,61;CL:0002194,4.12e-15,59;CL:0000576,4.12e-15,59;CL:0000040,4.12e-15,59;CL:0000559,4.12e-15,59;CL:0000557,1.16e-14,67;CL:0000839,3.79e-13,66;CL:0000766,9.10e-12,72;CL:0002076,3.10e-08,42;CL:0000763,1.02e-07,108;CL:0000049,1.02e-07,108;CL:0002031,1.64e-07,120;CL:0002149,2.77e-07,6;CL:0002255,2.77e-07,6;CL:0002087,5.07e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-16;42 | |||
|ontology_enrichment_disease=DOID:305!8.36e-08!106;DOID:3001!3.23e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.92e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.77e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.96e-13!80;UBERON:0001474!2.49e-11!86;UBERON:0002405!5.58e-10!115;UBERON:0004765!1.26e-09!101;UBERON:0001434!1.26e-09!101;UBERON:0002193!2.69e-09!112;UBERON:0002390!8.15e-09!102;UBERON:0003061!8.15e-09!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.19e-14,76;UBERON:0001474,8.76e-13,82;UBERON:0002405,2.81e-12,93;UBERON:0004765,2.68e-11,90;UBERON:0002390,4.67e-10,98;UBERON:0003061,4.67e-10,98;UBERON:0002193,5.42e-10,108;UBERON:0001434,8.87e-10,100 | |||
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| ||
|short_description=p@chr12:31909925..31909947,- | |||
}} | }} |
Latest revision as of 08:09, 24 July 2015
Short description: | p@chr12:31909925..31909947, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:31909925..31909947, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.36e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.36e-23 | 42 |
defensive cell | 7.94e-20 | 48 |
phagocyte | 7.94e-20 | 48 |
macrophage dendritic cell progenitor | 1.82e-16 | 61 |
monopoietic cell | 4.12e-15 | 59 |
monocyte | 4.12e-15 | 59 |
monoblast | 4.12e-15 | 59 |
promonocyte | 4.12e-15 | 59 |
granulocyte monocyte progenitor cell | 1.16e-14 | 67 |
myeloid lineage restricted progenitor cell | 3.79e-13 | 66 |
myeloid leukocyte | 9.10e-12 | 72 |
endo-epithelial cell | 3.10e-08 | 42 |
myeloid cell | 1.02e-07 | 108 |
common myeloid progenitor | 1.02e-07 | 108 |
hematopoietic lineage restricted progenitor cell | 1.64e-07 | 120 |
epithelial cell of uterus | 2.77e-07 | 6 |
stromal cell of endometrium | 2.77e-07 | 6 |
nongranular leukocyte | 5.07e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.19e-14 | 76 |
bone element | 8.76e-13 | 82 |
immune system | 2.81e-12 | 93 |
skeletal element | 2.68e-11 | 90 |
hematopoietic system | 4.67e-10 | 98 |
blood island | 4.67e-10 | 98 |
hemolymphoid system | 5.42e-10 | 108 |
skeletal system | 8.87e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.77e-07 | 6 |