FFCP PHASE1:Hg19::chr3:35683651..35683662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10777 | |EntrezGene=10777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |HGNC=16968 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBL0 | |UniProt=Q9UBL0 | ||
|association_with_transcript=0bp_to_ENST00000187397_5end | |association_with_transcript=0bp_to_ENST00000187397_5end | ||
|cluster_id=chr3:35683651..35683662,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_40_at_ARPP21_5end | |description=CAGE_peak_40_at_ARPP21_5end | ||
|id=chr3:35683651..35683662,+ | |id=chr3:35683651..35683662,+ | ||
|ontology_enrichment_celltype=CL:0000784!2.31e-10!3 | |ontology_enrichment_celltype=CL:0000784!2.31e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.38e-44;3!CL:0000817;3.61e-34;1!CL:0000451;6.11e-13;10!CL:0000840;8.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.91e-44,3;CL:0000451,5.76e-13,10;CL:0000817,2.31e-12,3;CL:0000840,8.48e-07,5;CL:0001029,8.48e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.41e-29!57;UBERON:0005068!2.41e-29!57;UBERON:0006241!2.41e-29!57;UBERON:0007135!2.41e-29!57;UBERON:0002616!2.96e-28!59;UBERON:0001869!1.89e-26!32;UBERON:0001893!8.18e-25!34;UBERON:0001950!4.34e-24!20;UBERON:0002780!5.30e-24!41;UBERON:0001890!5.30e-24!41;UBERON:0006240!5.30e-24!41;UBERON:0003080!2.18e-23!42;UBERON:0000955!2.32e-23!69;UBERON:0006238!2.32e-23!69;UBERON:0002619!7.10e-22!22;UBERON:0001017!9.00e-22!82;UBERON:0002791!1.70e-21!33;UBERON:0002020!7.95e-21!34;UBERON:0003528!7.95e-21!34;UBERON:0005743!1.27e-20!86;UBERON:0000956!3.42e-19!25;UBERON:0000203!3.42e-19!25;UBERON:0003075!1.89e-18!86;UBERON:0007284!1.89e-18!86;UBERON:0000073!2.23e-18!94;UBERON:0001016!2.23e-18!94;UBERON:0000153!2.91e-18!129;UBERON:0007811!2.91e-18!129;UBERON:0002346!1.72e-17!90;UBERON:0003056!1.81e-15!61;UBERON:0000341!1.37e-14!2;UBERON:0001870!2.70e-14!2;UBERON:0001871!2.17e-13!7;UBERON:0007023!3.90e-13!115;UBERON:0000033!7.98e-12!123;UBERON:0000974!2.45e-11!10;UBERON:0000200!1.58e-10!6;UBERON:0004733!5.97e-09!12;UBERON:0002028!5.97e-09!12;UBERON:0007277!5.97e-09!12;UBERON:0004121!7.97e-09!169;UBERON:0000924!1.52e-08!173;UBERON:0006601!1.52e-08!173;UBERON:0002702!2.52e-08!1;UBERON:0004732!2.85e-08!13;UBERON:0002370!4.56e-08!4;UBERON:0005058!4.56e-08!4;UBERON:0009113!4.56e-08!4;UBERON:0003295!4.56e-08!4;UBERON:0005562!4.56e-08!4;UBERON:0001874!6.19e-08!1;UBERON:0001882!7.10e-08!1;UBERON:0005403!7.10e-08!1;UBERON:0007190!9.29e-08!1;UBERON:0000369!1.70e-07!4;UBERON:0002435!1.70e-07!4;UBERON:0000204!1.70e-07!4;UBERON:0010082!1.70e-07!4;UBERON:0000025!2.24e-07!194;UBERON:0002680!3.43e-07!9;UBERON:0001895!3.43e-07!9;UBERON:0010092!3.43e-07!9;UBERON:0003076!3.49e-07!15;UBERON:0003057!3.49e-07!15;UBERON:0002420!4.16e-07!9;UBERON:0007245!4.16e-07!9;UBERON:0010009!4.16e-07!9;UBERON:0010011!4.16e-07!9;UBERON:0000454!4.16e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.41e-67;2!UBERON:0005058;7.41e-67;2!UBERON:0009113;7.41e-67;2!UBERON:0004177;1.59e-27;5!UBERON:0005057;1.59e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.28e-34,4;UBERON:0005058,4.28e-34,4;UBERON:0009113,4.28e-34,4;UBERON:0003295,4.28e-34,4;UBERON:0005562,4.28e-34,4;UBERON:0003351,3.88e-23,6;UBERON:0004177,5.35e-20,7;UBERON:0005057,5.35e-20,7;UBERON:0000974,2.49e-14,10;UBERON:0003408,2.49e-14,10;UBERON:0001042,2.49e-14,10;UBERON:0009145,2.49e-14,10;UBERON:0006562,4.00e-13,11;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0008814,2.09e-08,18;UBERON:0001557,5.16e-08,19 | |||
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|short_description=p40@ARPP21 | |short_description=p40@ARPP21 | ||
}} | }} |
Latest revision as of 01:16, 18 September 2015
Short description: | p40@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_ARPP21_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000187397_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | Q9UBL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.91e-44 | 3 |
dendritic cell | 5.76e-13 | 10 |
precursor B cell | 2.31e-12 | 3 |
immature conventional dendritic cell | 8.48e-07 | 5 |
common dendritic progenitor | 8.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.28e-34 | 4 |
hemolymphoid system gland | 4.28e-34 | 4 |
thymic region | 4.28e-34 | 4 |
pharyngeal gland | 4.28e-34 | 4 |
thymus primordium | 4.28e-34 | 4 |
pharyngeal epithelium | 3.88e-23 | 6 |
hemopoietic organ | 5.35e-20 | 7 |
immune organ | 5.35e-20 | 7 |
neck | 2.49e-14 | 10 |
gland of gut | 2.49e-14 | 10 |
chordate pharynx | 2.49e-14 | 10 |
pharyngeal region of foregut | 2.49e-14 | 10 |
pharynx | 4.00e-13 | 11 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
pharyngeal arch system | 2.09e-08 | 18 |
upper respiratory tract | 5.16e-08 | 19 |