FFCP PHASE1:Hg19::chr1:152975544..152975565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_AB587575_5end | |association_with_transcript=48bp_to_AB587575_5end | ||
|cluster_id=chr1:152975544..152975565,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_AB587575_5end | |description=CAGE_peak_2_at_AB587575_5end | ||
|id=chr1:152975544..152975565,+ | |id=chr1:152975544..152975565,+ | ||
|ontology_enrichment_celltype=CL:0002623!4.90e-11!3;CL:0002076!3.88e-10!43;CL:0002336!1.16e-08!1;CL:0002261!1.16e-08!1;CL:0002170!1.16e-08!1;CL:0002537!3.57e-07!5;CL:0000223!4.18e-07!59;CL:0000622!5.82e-07!5 | |ontology_enrichment_celltype=CL:0002623!4.90e-11!3;CL:0002076!3.88e-10!43;CL:0002336!1.16e-08!1;CL:0002261!1.16e-08!1;CL:0002170!1.16e-08!1;CL:0002537!3.57e-07!5;CL:0000223!4.18e-07!59;CL:0000622!5.82e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002593;3.42e-10;2!CL:0002231;3.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.58e-10,2;CL:0002231,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.95e-20;1!UBERON:0008814;1.57e-10;2!UBERON:0010056;1.57e-10;2 | |||
|ontology_enrichment_disease=DOID:3151!6.72e-09!1;DOID:3149!6.72e-09!1 | |ontology_enrichment_disease=DOID:3151!6.72e-09!1;DOID:3149!6.72e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!2.03e-16!2;UBERON:0000166!6.96e-13!21;UBERON:0000165!1.00e-12!28;UBERON:0000930!1.00e-12!28;UBERON:0001723!9.28e-12!3;UBERON:0001033!9.28e-12!3;UBERON:0010056!9.28e-12!3;UBERON:0001004!5.01e-11!72;UBERON:0000078!9.15e-11!18;UBERON:0003126!1.58e-10!7;UBERON:0001005!1.58e-10!7;UBERON:0000161!4.00e-10!35;UBERON:0002372!2.22e-09!1;UBERON:0001961!2.22e-09!1;UBERON:0001744!2.22e-09!1;UBERON:0001735!2.22e-09!1;UBERON:0004119!1.34e-08!169;UBERON:0000925!1.34e-08!169;UBERON:0006595!1.34e-08!169;UBERON:0000065!2.78e-08!53;UBERON:0001042!8.49e-08!10;UBERON:0009145!8.49e-08!10;UBERON:0006562!3.98e-07!11;UBERON:0001444!4.30e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.64e-25;3!UBERON:0001033;2.64e-25;3!UBERON:0002372;1.88e-19;1!UBERON:0001961;1.88e-19;1!UBERON:0001744;1.88e-19;1!UBERON:0001042;1.88e-19;1!UBERON:0001735;1.88e-19;1!UBERON:0005795;2.25e-19;1!UBERON:0000341;1.72e-10;2!UBERON:0006562;2.07e-10;2!UBERON:0003127;2.72e-10;2!UBERON:0002456;3.42e-10;2!UBERON:0001043;1.82e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.64e-25,3;UBERON:0001033,2.64e-25,3;UBERON:0010056,2.64e-25,3;UBERON:0002372,1.88e-19,1;UBERON:0001961,1.88e-19,1;UBERON:0001744,1.88e-19,1;UBERON:0001735,1.88e-19,1;UBERON:0001042,4.72e-17,10;UBERON:0009145,4.72e-17,10;UBERON:0006562,1.45e-15,11;UBERON:0000341,1.72e-10,2;UBERON:0003127,2.72e-10,2;UBERON:0002456,3.58e-10,2;UBERON:0001557,2.81e-09,19;UBERON:0000161,2.17e-08,36;UBERON:0000166,4.34e-08,22;UBERON:0001043,1.82e-07,3;UBERON:0009143,1.82e-07,3 | |||
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|short_description=p2@AB587575 | |short_description=p2@AB587575 | ||
}} | }} |
Latest revision as of 21:37, 27 July 2015
Short description: | p2@AB587575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB587575_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 48bp_to_AB587575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.58e-10 | 2 |
epithelial cell of prostate | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.64e-25 | 3 |
gustatory system | 2.64e-25 | 3 |
future tongue | 2.64e-25 | 3 |
tonsil | 1.88e-19 | 1 |
mucosa-associated lymphoid tissue | 1.88e-19 | 1 |
lymphoid tissue | 1.88e-19 | 1 |
tonsillar ring | 1.88e-19 | 1 |
chordate pharynx | 4.72e-17 | 10 |
pharyngeal region of foregut | 4.72e-17 | 10 |
pharynx | 1.45e-15 | 11 |
throat | 1.72e-10 | 2 |
open tracheal system trachea | 2.72e-10 | 2 |
internal thoracic artery | 3.58e-10 | 2 |
upper respiratory tract | 2.81e-09 | 19 |
orifice | 2.17e-08 | 36 |
oral opening | 4.34e-08 | 22 |
esophagus | 1.82e-07 | 3 |
esophageal region | 1.82e-07 | 3 |