FFCP PHASE1:Hg19::chr12:5590430..5590495,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:5590430..5590495,+
|short_description=p@chr12:5590430..5590495,+
|description=CAGE_peak_at_chr12:5590430..5590495,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:5590430..5590495,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr12:5590430..5590495,+ | |||
|id=chr12:5590430..5590495,+ | |||
|ontology_enrichment_celltype=CL:0002620!6.90e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.50e-16;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.47e-16,23 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.25e-15;3 | |||
|ontology_enrichment_disease=DOID:17!5.04e-07!5;DOID:450!5.04e-07!5;DOID:66!5.04e-07!5;DOID:423!5.04e-07!5;DOID:0080000!5.04e-07!5;DOID:11722!5.04e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.56e-09;5!DOID:450;1.56e-09;5!DOID:66;1.56e-09;5!DOID:423;1.56e-09;5!DOID:0080000;1.56e-09;5!DOID:11722;1.56e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.34e-09,5;DOID:450,1.34e-09,5;DOID:66,1.34e-09,5;DOID:423,1.34e-09,5;DOID:0080000,1.34e-09,5;DOID:11722,1.34e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-08!82;UBERON:0005743!1.73e-08!86;UBERON:0000033!3.94e-08!123;UBERON:0000153!4.52e-08!129;UBERON:0007811!4.52e-08!129;UBERON:0000955!8.33e-08!69;UBERON:0006238!8.33e-08!69;UBERON:0002097!1.96e-07!40;UBERON:0000073!2.71e-07!94;UBERON:0001016!2.71e-07!94;UBERON:0000924!3.42e-07!173;UBERON:0006601!3.42e-07!173;UBERON:0004121!6.98e-07!169;UBERON:0002199!8.61e-07!45;UBERON:0002416!8.61e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.48e-11;2!UBERON:0002757;1.48e-11;2!UBERON:0010134;1.48e-11;2!UBERON:0005408;1.48e-11;2!UBERON:0001899;1.48e-11;2!UBERON:0002037;8.80e-08;6!UBERON:0002097;2.54e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.48e-11,2;UBERON:0002757,1.48e-11,2;UBERON:0010134,1.48e-11,2;UBERON:0005408,1.48e-11,2;UBERON:0001899,1.48e-11,2;UBERON:0002097,3.63e-10,41;UBERON:0002199,7.37e-09,46;UBERON:0002416,7.37e-09,46;UBERON:0002037,6.97e-08,6;UBERON:0006215,6.97e-08,6 | |||
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| ||
|short_description=p@chr12:5590430..5590495,+ | |||
}} | }} |
Latest revision as of 10:08, 24 July 2015
Short description: | p@chr12:5590430..5590495, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:5590430..5590495, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.47e-16 | 23 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.48e-11 | 2 |
regional part of epithalamus | 1.48e-11 | 2 |
secretory circumventricular organ | 1.48e-11 | 2 |
circumventricular organ | 1.48e-11 | 2 |
epithalamus | 1.48e-11 | 2 |
skin of body | 3.63e-10 | 41 |
integument | 7.37e-09 | 46 |
integumental system | 7.37e-09 | 46 |
cerebellum | 6.97e-08 | 6 |
rhombic lip | 6.97e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.34e-09 | 5 |
myotonic disease | 1.34e-09 | 5 |
muscle tissue disease | 1.34e-09 | 5 |
myopathy | 1.34e-09 | 5 |
muscular disease | 1.34e-09 | 5 |
myotonic dystrophy | 1.34e-09 | 5 |