FFCP PHASE1:Hg19::chr12:56881937..56881963,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:56881937..56881963,-
|short_description=p2@GLS2
|description=CAGE_peak_2_at_GLS2_5end
|association_with_transcript=-1bp_to_ENST00000479952_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27165 | |EntrezGene=27165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29570 | |HGNC=29570 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBL8 | |UniProt=F8WBL8 | ||
|association_with_transcript=-1bp_to_ENST00000479952_5end | |||
|cluster_id=chr12:56881937..56881963,- | |||
|coexpression_cluster_id=C1364 | |||
|description=CAGE_peak_2_at_GLS2_5end | |||
|id=chr12:56881937..56881963,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.93e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.94e-12;82 | |||
|ontology_enrichment_disease=DOID:305!1.57e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.38e-34!115;UBERON:0001049!1.81e-31!57;UBERON:0005068!1.81e-31!57;UBERON:0006241!1.81e-31!57;UBERON:0007135!1.81e-31!57;UBERON:0001017!8.89e-29!82;UBERON:0005743!2.40e-28!86;UBERON:0002780!1.72e-26!41;UBERON:0001890!1.72e-26!41;UBERON:0006240!1.72e-26!41;UBERON:0000073!4.34e-26!94;UBERON:0001016!4.34e-26!94;UBERON:0000955!6.86e-26!69;UBERON:0006238!6.86e-26!69;UBERON:0003080!2.08e-25!42;UBERON:0002616!2.50e-25!59;UBERON:0003075!9.33e-23!86;UBERON:0007284!9.33e-23!86;UBERON:0002346!6.54e-22!90;UBERON:0002020!1.30e-21!34;UBERON:0003528!1.30e-21!34;UBERON:0001893!1.74e-21!34;UBERON:0001869!3.52e-21!32;UBERON:0002791!1.16e-20!33;UBERON:0002619!1.47e-18!22;UBERON:0001950!3.97e-17!20;UBERON:0003056!5.35e-17!61;UBERON:0000956!5.23e-16!25;UBERON:0000203!5.23e-16!25;UBERON:0004121!3.08e-15!169;UBERON:0000153!5.38e-15!129;UBERON:0007811!5.38e-15!129;UBERON:0000924!5.47e-15!173;UBERON:0006601!5.47e-15!173;UBERON:0000033!2.30e-14!123;UBERON:0000025!1.92e-09!194;UBERON:0004111!5.39e-09!241;UBERON:0001871!2.26e-07!7;UBERON:0003076!2.58e-07!15;UBERON:0003057!2.58e-07!15;UBERON:0002420!3.84e-07!9;UBERON:0007245!3.84e-07!9;UBERON:0010009!3.84e-07!9;UBERON:0010011!3.84e-07!9;UBERON:0000454!3.84e-07!9;UBERON:0002308!4.55e-07!9;UBERON:0000125!4.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.03e-31;22!UBERON:0001869;3.01e-31;32!UBERON:0002780;5.96e-31;41!UBERON:0001890;5.96e-31;41!UBERON:0003528;6.15e-30;34!UBERON:0002020;6.15e-30;34!UBERON:0001893;2.13e-29;34!UBERON:0002791;5.81e-29;32!UBERON:0001950;1.06e-28;20!UBERON:0000073;8.47e-28;53!UBERON:0002616;8.47e-28;53!UBERON:0000956;6.70e-27;25!UBERON:0000203;6.70e-27;25!UBERON:0000955;4.22e-21;68!UBERON:0001017;3.75e-19;75!UBERON:0001016;2.25e-14;83!UBERON:0001871;5.75e-11;6!UBERON:0000200;6.96e-11;6!UBERON:0001894;9.99e-11;7!UBERON:0004733;9.49e-10;12!UBERON:0002028;9.49e-10;12!UBERON:0002298;4.16e-09;6!UBERON:0002021;7.51e-09;5!UBERON:0004732;7.83e-09;13!UBERON:0002420;7.99e-09;9!UBERON:0007245;7.99e-09;9!UBERON:0010009;7.99e-09;9!UBERON:0010011;7.99e-09;9!UBERON:0000454;7.99e-09;9!UBERON:0000125;8.90e-09;9!UBERON:0002308;8.90e-09;9!UBERON:0007023;1.38e-08;114!UBERON:0000349;1.83e-08;5!UBERON:0011216;4.79e-08;132!UBERON:0000369;1.07e-07;4!UBERON:0002435;1.07e-07;4!UBERON:0000204;1.07e-07;4!UBERON:0003296;2.89e-07;4!UBERON:0010133;2.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.19e-53,56;UBERON:0005068,2.19e-53,56;UBERON:0006241,2.19e-53,56;UBERON:0007135,2.19e-53,56;UBERON:0000073,3.90e-52,53;UBERON:0002616,3.90e-52,53;UBERON:0001017,1.60e-46,81;UBERON:0000955,3.49e-45,68;UBERON:0006238,3.49e-45,68;UBERON:0002780,1.39e-43,41;UBERON:0001890,1.39e-43,41;UBERON:0003080,1.39e-43,41;UBERON:0006240,1.39e-43,41;UBERON:0001016,3.88e-40,89;UBERON:0003075,5.82e-35,82;UBERON:0007284,5.82e-35,82;UBERON:0001869,1.11e-34,32;UBERON:0003528,1.92e-34,34;UBERON:0002020,1.92e-34,34;UBERON:0001893,3.24e-34,34;UBERON:0002346,1.36e-32,86;UBERON:0002791,7.74e-32,32;UBERON:0002619,1.14e-31,22;UBERON:0003056,5.93e-29,61;UBERON:0001950,5.99e-29,20;UBERON:0010371,8.74e-28,104;UBERON:0000956,4.04e-27,25;UBERON:0000203,4.04e-27,25;UBERON:0011216,2.06e-25,223;UBERON:0007023,4.69e-24,114;UBERON:0004121,2.11e-18,171;UBERON:0000924,2.11e-18,171;UBERON:0006601,2.11e-18,171;UBERON:0010314,5.85e-18,132;UBERON:0000025,2.26e-16,192;UBERON:0004111,2.33e-12,240;UBERON:0001871,3.94e-11,6;UBERON:0003076,5.76e-11,15;UBERON:0003057,5.76e-11,15;UBERON:0000200,6.85e-11,6;UBERON:0001894,7.89e-11,7;UBERON:0006222,7.89e-11,7;UBERON:0004733,1.03e-09,12;UBERON:0002028,1.03e-09,12;UBERON:0007277,1.03e-09,12;UBERON:0002298,4.45e-09,6;UBERON:0002021,6.23e-09,5;UBERON:0002420,7.34e-09,9;UBERON:0007245,7.34e-09,9;UBERON:0010009,7.34e-09,9;UBERON:0010011,7.34e-09,9;UBERON:0000454,7.34e-09,9;UBERON:0004732,8.41e-09,13;UBERON:0000125,9.56e-09,9;UBERON:0002308,9.56e-09,9;UBERON:0000483,1.01e-08,306;UBERON:0000349,1.62e-08,5;UBERON:0000119,1.83e-08,309;UBERON:0000369,1.06e-07,4;UBERON:0002435,1.06e-07,4;UBERON:0000204,1.06e-07,4;UBERON:0010082,1.06e-07,4;UBERON:0003296,3.10e-07,4;UBERON:0010133,3.10e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0,0.458480434487708,0.328402357799783,0.236132343941038,0.393364276848904,0,0,0,0,0.739508020333575,4.26069603191659,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0.426730222566507,0.400395987036012,1.14950487990897,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0.590129310341499,0.786021525498329,0.411202997999018,0.334372990781356,1.30368906653436,0.473447805734733,1.94826728407911,0,0.294605907474837,0.443067789167242,0.270803863765016,0.512365278902701,0.130059347559878,0.164437904603676,0.552700035571697,0.579606171470105,1.63115219478266,1.33770414044857,3.1360657141493,0,0.766440987203842,0.34362744548263,0.759059076058509,0.637130828648193,1.30216690771284,0,0.903450714466637,1.53583933385302,3.74792179657038,1.89421801635213,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,1.96468613246569,0,0.370784442784429,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53723747775827,2.12047629314376,1.39432731443422,2.90250954043037,2.52320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.5881215895351,2.94848165003288,14.7697476670351,0,2.33678033231916,0,0,0,0.100528972411631,0.740707561268237,0,0,0,0,0.117408694235822,0,0,0.190254152234598,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0.268675568108545,0.290633938513962,1.53353071666084,0,0,0,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0.644566922551274,0,0,0,0.451199612907412,0.539107359730903,0,0,0.211103257785751,1.13733384070897,0,0.215915916102139,0,0,0,0.254876273045038,1.66215201785745,0,0,0,0.512900250232778,0,0,29.0575652846577,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,26.0778328151678,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0.640944426764839,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73705945469591,0.146508179271894,4.490339304732,0,0,0,0,0,3.97659059106519,8.01815673539923,0,0,3.58913193817589,0.597743964753209,0.552567831062295,3.02319297425131,0.20453736500431,0.123084805461069,0,0.359473404589307,0,0,0.0986434056369336,0,0,19.3866549219044,11.9670846628788,3.99227596002388,0,2.44887999989348,0,1.2517279311405,0.762760950878299,0,0.344743373241465,0.583209226766509,0.347249989866585,15.0576035588353,11.6978545466646,13.7323562685375,11.3896637729161,12.7085476150025,13.3825092263923,0,1.11538995422883,0.538651809526579,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,2.96841450011276,0.865554558968364,0.995261931078505,0.265372693510018,1.22206028986725,0,0,0,1.07841812769083,0,3.74823113160543,0,0.586993856796269,0,0.394584402849391,3.62972148145992,1.83643656978294,0.252746318513952,3.60776206594782,0.518440956986236,0,0,0,0,0,0,2.08271686002157,0,0.522355239482415,0.698906672968121,0.687944129886466,0,0,0.0821154570532092,0.484945082442097,1.588610280447,1.80784592624426,0,0,11.6491864558817,0.782205530939212,0.64127056201227,0.213452994739353,0.999048047910651,4.8990741832396,0.458146384663663,0.171594997861965,0,0.869767748958028,0.707082103850386,0,0,0,0,6.00420288709789,0.958337652243951,0,0,0,0.279282401272254,0,0.717873024576814,0.599037001496973,0.429226048136571,0,0,0,3.49487848582361,1.81201319306614,1.15382201733633,1.88729922791718,0.196854963029498,0,4.77137813885582,4.08610218334727,2.41129722697529,2.47570985875021,2.9080823662043,1.799791132412,3.86900977278975,11.8461635483148,0.335434687599266,0.551639951094387,0.472091293214983,0,0,1.15149118391667,0,0,0.5085370753095,0,0,0.326587360109409,0,0.164185041498678,0,0.113312091520126,29.0173422682603,54.3278244540107,5.42988416718512,3.17358244182456,0,0,0.640724475406168,0,0.828478110694391,1.48849806543585,0,3.53198535304598,0,0,0,0,0,0,16.8352954193727,12.5687052849022,7.01069211956399,2.29363678276028,2.77322628842131,3.66368777354162,0.968440444553616,0.37494122388632,0.151649117541648,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447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| ||
|short_description=p2@GLS2 | |||
}} | }} |
Latest revision as of 11:08, 19 September 2015
Short description: | p2@GLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GLS2_5end |
Coexpression cluster: | C1364_Hepatocyte_liver_occipital_cerebellum_somatostatinoma_small_pancreas |
Association with transcript: | -1bp_to_ENST00000479952_5end |
EntrezGene: | GLS2 |
HGNC: | 29570 |
UniProt: | F8WBL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.04e-07 | 5 |