FFCP PHASE1:Hg19::chr1:186644510..186644524,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5743 | |EntrezGene=5743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9605 | |HGNC=9605 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=476bp_to_ENST00000466691_5end | |association_with_transcript=476bp_to_ENST00000466691_5end | ||
|cluster_id=chr1:186644510..186644524,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_5_at_PTGS2_5end | |description=CAGE_peak_5_at_PTGS2_5end | ||
|id=chr1:186644510..186644524,- | |id=chr1:186644510..186644524,- | ||
|ontology_enrichment_celltype=CL:0000860!1.15e-26!45;CL:0002057!1.31e-24!42;CL:0000766!6.97e-24!76;CL:0000557!1.06e-21!71;CL:0000839!1.46e-19!70;CL:0002009!3.11e-18!65;CL:0000763!9.48e-17!112;CL:0000049!9.48e-17!112;CL:0002194!1.25e-16!63;CL:0000576!1.25e-16!63;CL:0000040!1.25e-16!63;CL:0000559!1.25e-16!63;CL:0000738!5.75e-12!140;CL:0000723!4.13e-10!436;CL:0000048!1.03e-09!430;CL:0000034!1.94e-09!444;CL:0000037!3.51e-09!172;CL:0000566!3.51e-09!172;CL:0002031!3.70e-09!124;CL:0002032!1.51e-08!165;CL:0000837!1.51e-08!165;CL:0002371!2.53e-08!591;CL:0000134!5.37e-08!358;CL:0000988!6.33e-08!182;CL:0002320!1.93e-07!365;CL:0002087!2.00e-07!119 | |ontology_enrichment_celltype=CL:0000860!1.15e-26!45;CL:0002057!1.31e-24!42;CL:0000766!6.97e-24!76;CL:0000557!1.06e-21!71;CL:0000839!1.46e-19!70;CL:0002009!3.11e-18!65;CL:0000763!9.48e-17!112;CL:0000049!9.48e-17!112;CL:0002194!1.25e-16!63;CL:0000576!1.25e-16!63;CL:0000040!1.25e-16!63;CL:0000559!1.25e-16!63;CL:0000738!5.75e-12!140;CL:0000723!4.13e-10!436;CL:0000048!1.03e-09!430;CL:0000034!1.94e-09!444;CL:0000037!3.51e-09!172;CL:0000566!3.51e-09!172;CL:0002031!3.70e-09!124;CL:0002032!1.51e-08!165;CL:0000837!1.51e-08!165;CL:0002371!2.53e-08!591;CL:0000134!5.37e-08!358;CL:0000988!6.33e-08!182;CL:0002320!1.93e-07!365;CL:0002087!2.00e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.51e-28;33!CL:0002057;9.51e-28;33!CL:0000473;1.85e-19;39!CL:0000234;1.85e-19;39!CL:0000775;3.03e-17;3!CL:0000766;3.08e-15;69!CL:0000576;1.23e-13;48!CL:0000094;1.90e-11;8!CL:0000081;2.40e-08;11!CL:0000763;1.84e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.93e-30,42;CL:0002057,3.93e-30,42;CL:0000766,7.28e-29,72;CL:0000473,6.28e-26,48;CL:0000234,6.28e-26,48;CL:0000839,4.15e-20,66;CL:0002194,4.80e-20,59;CL:0000576,4.80e-20,59;CL:0000040,4.80e-20,59;CL:0000559,4.80e-20,59;CL:0000557,9.29e-20,67;CL:0002009,2.76e-19,61;CL:0000763,8.44e-18,108;CL:0000049,8.44e-18,108;CL:0000775,2.95e-17,3;CL:0000738,3.18e-13,136;CL:0000094,1.83e-11,8;CL:0002032,1.75e-10,161;CL:0000837,1.75e-10,161;CL:0000037,7.31e-10,168;CL:0002031,1.68e-09,120;CL:0000988,3.87e-09,177;CL:0002087,1.00e-08,115;CL:0000081,2.34e-08,11;CL:0000048,1.68e-07,427;CL:0000723,2.63e-07,433;CL:0000034,4.71e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.03e-20;42!UBERON:0005754;4.96e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.78e-19!80;UBERON:0001474!6.79e-18!86;UBERON:0002390!1.37e-17!102;UBERON:0003061!1.37e-17!102;UBERON:0002193!2.52e-17!112;UBERON:0004765!5.29e-16!101;UBERON:0001434!5.29e-16!101;UBERON:0002204!1.22e-13!167;UBERON:0003081!3.99e-13!216;UBERON:0002405!4.43e-13!115 | |ontology_enrichment_uberon=UBERON:0002371!5.78e-19!80;UBERON:0001474!6.79e-18!86;UBERON:0002390!1.37e-17!102;UBERON:0003061!1.37e-17!102;UBERON:0002193!2.52e-17!112;UBERON:0004765!5.29e-16!101;UBERON:0001434!5.29e-16!101;UBERON:0002204!1.22e-13!167;UBERON:0003081!3.99e-13!216;UBERON:0002405!4.43e-13!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.61e-08;3!UBERON:0004054;1.61e-08;3!UBERON:0000998;4.96e-07;1!UBERON:0006868;4.96e-07;1!UBERON:0001000;5.41e-07;1!UBERON:0005352;5.41e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.16e-17,76;UBERON:0001474,1.62e-15,82;UBERON:0002390,4.53e-14,98;UBERON:0003061,4.53e-14,98;UBERON:0004765,7.91e-14,90;UBERON:0002405,2.86e-13,93;UBERON:0003081,1.41e-12,203;UBERON:0002193,2.01e-12,108;UBERON:0001434,4.26e-12,100;UBERON:0002204,5.32e-11,167;UBERON:0000926,1.39e-08,315;UBERON:0004120,1.39e-08,315;UBERON:0006603,1.39e-08,315;UBERON:0006947,1.58e-08,3;UBERON:0004054,1.58e-08,3;UBERON:0000998,4.97e-07,1;UBERON:0006868,4.97e-07,1;UBERON:0001000,5.26e-07,1;UBERON:0005352,5.26e-07,1 | |||
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| ||
|short_description=p5@PTGS2 | |short_description=p5@PTGS2 | ||
}} | }} |
Latest revision as of 08:16, 19 September 2015
Short description: | p5@PTGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTGS2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 476bp_to_ENST00000466691_5end |
EntrezGene: | PTGS2 |
HGNC: | 9605 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.93e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.93e-30 | 42 |
myeloid leukocyte | 7.28e-29 | 72 |
defensive cell | 6.28e-26 | 48 |
phagocyte | 6.28e-26 | 48 |
myeloid lineage restricted progenitor cell | 4.15e-20 | 66 |
monopoietic cell | 4.80e-20 | 59 |
monocyte | 4.80e-20 | 59 |
monoblast | 4.80e-20 | 59 |
promonocyte | 4.80e-20 | 59 |
granulocyte monocyte progenitor cell | 9.29e-20 | 67 |
macrophage dendritic cell progenitor | 2.76e-19 | 61 |
myeloid cell | 8.44e-18 | 108 |
common myeloid progenitor | 8.44e-18 | 108 |
neutrophil | 2.95e-17 | 3 |
leukocyte | 3.18e-13 | 136 |
granulocyte | 1.83e-11 | 8 |
hematopoietic oligopotent progenitor cell | 1.75e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-10 | 161 |
hematopoietic stem cell | 7.31e-10 | 168 |
hematopoietic lineage restricted progenitor cell | 1.68e-09 | 120 |
hematopoietic cell | 3.87e-09 | 177 |
nongranular leukocyte | 1.00e-08 | 115 |
blood cell | 2.34e-08 | 11 |
multi fate stem cell | 1.68e-07 | 427 |
somatic stem cell | 2.63e-07 | 433 |
stem cell | 4.71e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.16e-17 | 76 |
bone element | 1.62e-15 | 82 |
hematopoietic system | 4.53e-14 | 98 |
blood island | 4.53e-14 | 98 |
skeletal element | 7.91e-14 | 90 |
immune system | 2.86e-13 | 93 |
lateral plate mesoderm | 1.41e-12 | 203 |
hemolymphoid system | 2.01e-12 | 108 |
skeletal system | 4.26e-12 | 100 |
musculoskeletal system | 5.32e-11 | 167 |
mesoderm | 1.39e-08 | 315 |
mesoderm-derived structure | 1.39e-08 | 315 |
presumptive mesoderm | 1.39e-08 | 315 |
male genital duct | 1.58e-08 | 3 |
internal male genitalia | 1.58e-08 | 3 |
seminal vesicle | 4.97e-07 | 1 |
seminal fluid secreting gland | 4.97e-07 | 1 |
vas deferens | 5.26e-07 | 1 |
spermatic cord | 5.26e-07 | 1 |