FFCP PHASE1:Hg19::chr1:225698398..225698402,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:225698398..225698402,- | |||
|description=CAGE_peak_at_chr1:225698398..225698402,- | |description=CAGE_peak_at_chr1:225698398..225698402,- | ||
|id=chr1:225698398..225698402,- | |id=chr1:225698398..225698402,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.23e-13;3!CL:0000067;1.23e-13;3!CL:0005012;1.23e-13;3!CL:0002304;1.23e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.22e-13,3;CL:0000067,8.22e-13,3;CL:0005012,8.22e-13,3;CL:0002304,8.22e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.65e-10;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.12e-17!143;DOID:162!1.95e-12!235;DOID:14566!1.06e-11!239;DOID:305!1.12e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.92e-10!82;UBERON:0000073!1.18e-09!94;UBERON:0001016!1.18e-09!94;UBERON:0005743!7.02e-09!86;UBERON:0000955!1.11e-08!69;UBERON:0006238!1.11e-08!69 | |ontology_enrichment_uberon=UBERON:0001017!3.92e-10!82;UBERON:0000073!1.18e-09!94;UBERON:0001016!1.18e-09!94;UBERON:0005743!7.02e-09!86;UBERON:0000955!1.11e-08!69;UBERON:0006238!1.11e-08!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.23e-13;3!UBERON:0001775;1.23e-13;3!UBERON:0000488;2.38e-10;4!UBERON:0002050;1.30e-08;5!UBERON:0005423;1.30e-08;5!UBERON:0002203;4.82e-07;6!UBERON:0001768;4.82e-07;6!UBERON:0002200;4.82e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,8.22e-13,3;UBERON:0001775,8.22e-13,3;UBERON:0000488,9.74e-10,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0.434539556882471,0,0.973269740605272,1.03988298880475,1.10864698731282,1.05401742831751,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,1.49091585508596,0,0.662045904066094,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0.309977343527296,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0.89694817844431,0,0,0.300091096084402,0,0,0,1.68776332241266,0.292311015483596,0,0,0,0,0.10075209822764,0.169560592310488,0,0.545492241181669,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,1.24900292158013,0.630809660135739,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.321707842287215,0,0,0,0.164254312027618,0,0,0,0.601519410909855,0,0,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.41254749960294,0,0,0,0,0.462145851343933,0.307007349452259,0,0.429680979473094,0.435050081742686,0.0852266274161009,0.267096106940212,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0.144269212976445,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0,0,0,1.9882952955326,0.281338832821026,0.445234820091624,0,1.68900326502395,1.59398390600856,0.276283915531148,0.251932747854276,2.14764233254525,0,0,0.179736702294654,0.716084698702437,0,0.197286811273867,0,1.11136990144637,1.93866549219044,0,3.99227596002388,0.520855522170466,0.262379999988587,0,0.227586896570999,0.254253650292766,0,2.06846023944879,0,0.347249989866585,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0.41827123283581,0.230850775511391,0.683652335082007,0.23056390438806,1.07709173291727,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0.163232808159148,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0,0.494255755786011,0.208843899010911,0.134802265961354,1.60515529459758,0.702793337176017,0.182454789215666,0,0.485560759068186,0.789168805698781,0,0.61214552326098,0.379119477770928,0.450970258243478,0.311064574191741,0,0,0,0,0.569219092059585,0.277349346026277,0.173559738335131,0.0979923974143777,0.261177619741208,0.17472666824203,2.0638323896594,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0.0882561266915003,0.225980740780532,0.274083849293502,0,0,0.195551382734803,0.160317640503067,0.426905989478705,0.19980960958213,0.144090417154106,0.229073192331831,0.343189995723929,0.288109595976299,0.248505071130865,0,0.67952103036807,0.523014231561666,0.917983958726896,0.577901179803038,0,0.273810757783986,0,3.43812353135966,0,0,1.3749625440701,0,0.199679000498991,0,0.446342914883745,0.268733889946905,0,1.16495949527454,0.157566364614447,0,0.0674035438541849,0.492137407573744,0,0.795229689809303,0.136203406111576,0.160753148465019,0.550157746388935,0.415440338029185,0.2249738915515,0.77380195455795,0.0607495566580247,0.670869375198532,0,0.0524545881349981,0.211200673038813,0.179287339332845,1.15149118391667,0,0,0.76280561296425,0,0,0,0,0.082092520749339,0,0.339936274560377,0,0,0.387848869084652,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0,0.197611631897944,0,0,1.63205341010842,0,0,0,0.314108192500469,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.0620964029413835,1.38348634936231,0.249960815924213,0.303298235083296,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0.453692771289717,0,0.443565449968902,0,0,0.310525913752519,0,0,1.5652351854352,0.300515217994437,0.380805212168795,0,0.545545977607678,0.107410557042488,0.464033759878494,1.59238355479446,0,0,0.336749488765919,2.52369796457302,0,0.214441591374926,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.983091635014877,0,0,0.106691729694141,0.172214979660816,0.567515953566836,0.368211900503681,0,0,0.639471856518258,0.862598491173454,0.157265941855896,0.873677105536111,0.509197589862076,1.2754495206101,0.867550349813015,0,0.318004350653419,0.0788617450012534,1.60114149657094,0.352675943690684,1.2249819094128,0,0,0.159633859057151,0.615349092722265,0.504143392443436,0.0691572524642179,0,0,0.687034029507179,0.353909170043221,0,0.115525666150338,0.381382095467167,0,1.39241355481392,0.150420656698515,0.80682027481408,0,0.785720083444267,0.327543835020193,0,0.0675375846183947,0.781078098613847,0.826747186004736,0.0634158101939068,1.09394961803644,0,1.98484471355718,1.05522746615772,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0,0,0.171488009437418,0.135939465953663,0,0.590969204419841,0.667388411352415,0.078493092850514,0,0,0,0.431855182437243,0.9555033757741,0,3.16027223465453,0.929931402945002,0.347716544605159,0.801711364730253,0.414432328326074,0,0,0,0,0.0852134047591577,1.69354820076372,0.22910686854405,0,0.955538938977433,0.223710863595585,0,0.121917924982269,0.647428837187895,0,2.3196288626764,1.45713297917742,0.467878926924211,0.596852325484105,0.594600453887843,0.22589216407792,1.31928620094515,0.603851374266694,0,0.655678681511872,0,1.22574160876953,0,0.196308467114945,0.297046400327086,1.6906229103336,0.169927114687817,0.187967835959707,0.128915775947154,0,0.71421575442263,0,0,2.19100916473955,0,0.860037498908708,0.157771562193185,0.203974470572744,0.436350690340377,0,0.743990036333503,0.924351257262837,0.432626562123789,0.252332849670158,0,0.760191006068622,0.305966489225945,0,0.36757959813938,0,0.151557396436479,0,1.65833887891756,0.517164979309476,0.639701945702943,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.808468755832877,0,0,0,0.358611026963382,1.66330178273007,0.651226148887796,0,0,0.179650404213174,0,0.244482888365733,2.03448089157869,0.665756774185513,0.201273793591026,0 | |phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0.434539556882471,0,0.973269740605272,1.03988298880475,1.10864698731282,1.05401742831751,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,1.49091585508596,0,0.662045904066094,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0.309977343527296,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0.89694817844431,0,0,0.300091096084402,0,0,0,1.68776332241266,0.292311015483596,0,0,0,0,0.10075209822764,0.169560592310488,0,0.545492241181669,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,1.24900292158013,0.630809660135739,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.321707842287215,0,0,0,0.164254312027618,0,0,0,0.601519410909855,0,0,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.41254749960294,0,0,0,0,0.462145851343933,0.307007349452259,0,0.429680979473094,0.435050081742686,0.0852266274161009,0.267096106940212,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0.144269212976445,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0,0,0,1.9882952955326,0.281338832821026,0.445234820091624,0,1.68900326502395,1.59398390600856,0.276283915531148,0.251932747854276,2.14764233254525,0,0,0.179736702294654,0.716084698702437,0,0.197286811273867,0,1.11136990144637,1.93866549219044,0,3.99227596002388,0.520855522170466,0.262379999988587,0,0.227586896570999,0.254253650292766,0,2.06846023944879,0,0.347249989866585,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0.41827123283581,0.230850775511391,0.683652335082007,0.23056390438806,1.07709173291727,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0.163232808159148,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0,0.494255755786011,0.208843899010911,0.134802265961354,1.60515529459758,0.702793337176017,0.182454789215666,0,0.485560759068186,0.789168805698781,0,0.61214552326098,0.379119477770928,0.450970258243478,0.311064574191741,0,0,0,0,0.569219092059585,0.277349346026277,0.173559738335131,0.0979923974143777,0.261177619741208,0.17472666824203,2.0638323896594,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0.0882561266915003,0.225980740780532,0.274083849293502,0,0,0.195551382734803,0.160317640503067,0.426905989478705,0.19980960958213,0.144090417154106,0.229073192331831,0.343189995723929,0.288109595976299,0.248505071130865,0,0.67952103036807,0.523014231561666,0.917983958726896,0.577901179803038,0,0.273810757783986,0,3.43812353135966,0,0,1.3749625440701,0,0.199679000498991,0,0.446342914883745,0.268733889946905,0,1.16495949527454,0.157566364614447,0,0.0674035438541849,0.492137407573744,0,0.795229689809303,0.136203406111576,0.160753148465019,0.550157746388935,0.415440338029185,0.2249738915515,0.77380195455795,0.0607495566580247,0.670869375198532,0,0.0524545881349981,0.211200673038813,0.179287339332845,1.15149118391667,0,0,0.76280561296425,0,0,0,0,0.082092520749339,0,0.339936274560377,0,0,0.387848869084652,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0,0.197611631897944,0,0,1.63205341010842,0,0,0,0.314108192500469,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.0620964029413835,1.38348634936231,0.249960815924213,0.303298235083296,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0.453692771289717,0,0.443565449968902,0,0,0.310525913752519,0,0,1.5652351854352,0.300515217994437,0.380805212168795,0,0.545545977607678,0.107410557042488,0.464033759878494,1.59238355479446,0,0,0.336749488765919,2.52369796457302,0,0.214441591374926,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.983091635014877,0,0,0.106691729694141,0.172214979660816,0.567515953566836,0.368211900503681,0,0,0.639471856518258,0.862598491173454,0.157265941855896,0.873677105536111,0.509197589862076,1.2754495206101,0.867550349813015,0,0.318004350653419,0.0788617450012534,1.60114149657094,0.352675943690684,1.2249819094128,0,0,0.159633859057151,0.615349092722265,0.504143392443436,0.0691572524642179,0,0,0.687034029507179,0.353909170043221,0,0.115525666150338,0.381382095467167,0,1.39241355481392,0.150420656698515,0.80682027481408,0,0.785720083444267,0.327543835020193,0,0.0675375846183947,0.781078098613847,0.826747186004736,0.0634158101939068,1.09394961803644,0,1.98484471355718,1.05522746615772,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0,0,0.171488009437418,0.135939465953663,0,0.590969204419841,0.667388411352415,0.078493092850514,0,0,0,0.431855182437243,0.9555033757741,0,3.16027223465453,0.929931402945002,0.347716544605159,0.801711364730253,0.414432328326074,0,0,0,0,0.0852134047591577,1.69354820076372,0.22910686854405,0,0.955538938977433,0.223710863595585,0,0.121917924982269,0.647428837187895,0,2.3196288626764,1.45713297917742,0.467878926924211,0.596852325484105,0.594600453887843,0.22589216407792,1.31928620094515,0.603851374266694,0,0.655678681511872,0,1.22574160876953,0,0.196308467114945,0.297046400327086,1.6906229103336,0.169927114687817,0.187967835959707,0.128915775947154,0,0.71421575442263,0,0,2.19100916473955,0,0.860037498908708,0.157771562193185,0.203974470572744,0.436350690340377,0,0.743990036333503,0.924351257262837,0.432626562123789,0.252332849670158,0,0.760191006068622,0.305966489225945,0,0.36757959813938,0,0.151557396436479,0,1.65833887891756,0.517164979309476,0.639701945702943,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.808468755832877,0,0,0,0.358611026963382,1.66330178273007,0.651226148887796,0,0,0.179650404213174,0,0.244482888365733,2.03448089157869,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr1:225698398..225698402,- | |short_description=p@chr1:225698398..225698402,- | ||
}} | }} |
Latest revision as of 04:28, 28 July 2015
Short description: | p@chr1:225698398..225698402, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:225698398..225698402, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.22e-13 | 3 |
ciliated epithelial cell | 8.22e-13 | 3 |
multi-ciliated epithelial cell | 8.22e-13 | 3 |
non-pigmented ciliary epithelial cell | 8.22e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 8.22e-13 | 3 |
ciliary body | 8.22e-13 | 3 |
atypical epithelium | 9.74e-10 | 4 |