FFCP PHASE1:Hg19::chr5:179251016..179251030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8878 | |EntrezGene=8878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11280 | |HGNC=11280 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=158bp_to_ENST00000466342_5end | |association_with_transcript=158bp_to_ENST00000466342_5end | ||
|cluster_id=chr5:179251016..179251030,+ | |||
|description=CAGE_peak_9_at_SQSTM1_5end | |description=CAGE_peak_9_at_SQSTM1_5end | ||
|id=chr5:179251016..179251030,+ | |id=chr5:179251016..179251030,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.17e-08!679;CL:0000004!1.17e-08!679;CL:0000255!1.17e-08!679;CL:0000012!4.15e-08!682;CL:0000222!6.06e-08!119;CL:0000860!4.90e-07!45 | |ontology_enrichment_celltype=CL:0000548!1.17e-08!679;CL:0000004!1.17e-08!679;CL:0000255!1.17e-08!679;CL:0000012!4.15e-08!682;CL:0000222!6.06e-08!119;CL:0000860!4.90e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.07e-09;33!CL:0002057;4.07e-09;33!CL:0000473;3.38e-07;39!CL:0000234;3.38e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.33e-07,42;CL:0002057,6.33e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.18e-07;3!DOID:127;4.18e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.39e-07,3;DOID:127,4.39e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000926!6.81e-08!448;UBERON:0004120!6.81e-08!448;UBERON:0006603!6.81e-08!448;UBERON:0002204!4.61e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.22e-07,315;UBERON:0004120,2.22e-07,315;UBERON:0006603,2.22e-07,315 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,1.0007329835313,1.34088328328186,1.74467704820074,2.53299878168311,1.26343974685366,0.261185628199839,0,0,0,0.263766978228454,0.37129905888014,0.331397375727916,1.34465029290355,1.20538905604795,1.46062018077475,2.43966399395253,0,0.204000691244253,0.313454721478088,0,0.410623275218653,0.251085279189606,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,1.10926203050036,0,0,0,0,0.601633342410425,0,0.447830948479849,0.971680998056939,0,0.726991193897824,3.02300754951048,0.970336244751265,2.32429036905685,5.34518254428373,1.54853185447552,1.1507695692886,1.2808035326455,0.709446689665756,1.72372840368309,0.645484683583826,0,3.38836211176688,3.547779950752,0.898893937780338,1.53041946185451,0.320929027076094,2.55734850319616,2.30895910130701,0.997318288108159,0.852449501065388,1.45104619314292,0,2.4912889959823,0.75374599577023,0,0.434377689410233,1.21079900526674,1.10483290796269,0.316462387440884,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.16072558669708,0.570025487482497,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.222820913770347,0,0,0.541607727530031,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.869079113764942,0.795285947051099,0.486634870302636,0.189069634328136,0,0.175669571386252,0,0.728590576585084,0,0,0.174129737299267,1.06366368415092,0,0,0.371457501329565,0,0,0,0.56530794192401,0.838998872419812,1.6507082516404,0.417989933073621,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.976248230192678,0,1.62028389576352,0.17859945656816,0.22452937262617,0.112611480483322,0,0.949265659568129,0.549605231791222,1.31780417436063,0,0,0,0.633152558322899,1.19168262731897,0,0.354668382198357,0.560677600142307,3.20246987189115,1.48000529050296,0.311211035399766,0.808264032418128,0.653847612453835,0.151357427644931,0,0,0.624320153660641,0,0.597794722207204,0.117434498643765,0,0,0,0.368502951935304,0.929932030581889,2.37600571456411,2.22540236350701,0,0,0.168336113954066,0.125118519871964,0,0,1.5324389789951,1.95309476578576,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.276149695926898,0.484938170456436,0,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0.464367928031979,1.44375896333917,0.828147600278907,1.01150814046861,0,0.55146986366197,0.871517776369625,0.71181185733329,1.21348177344148,0.392442930250692,1.53898862778556,0.738155454624648,0,0,0,1.26755034821831,0,0,0.441463099414651,0.368965315629341,0.171567810298526,0.329250856225877,1.1240175325762,0.100528972411631,0,1.62904152655162,0,0,0.115930404975077,0.117408694235822,1.15493158208859,1.38895653772983,1.52203321787679,1.58040879591855,0,0.492434012174795,0.468008530278475,0.445893486866185,0.93733833986777,0,0,0,0,0.383382679165211,0,0.528290604079356,0.621984346622316,1.15295962733569,0.88369703398466,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.571652865261156,0,0.87192013766656,0.07333828582095,0.517086863031111,0,0,0.531876233169741,0,0,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0,0.602878754119172,1.74306691720059,1.59956785891291,0,0.502257091432126,2.10833939483032,0.479249710983165,1.14861935834114,0,0.579125226670317,1.02738161275192,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,1.00034104211935,0.813795071099207,1.03985430765404,1.78428988797162,0,0.702848489956279,0.601892199455438,6.82222512167955,0,0,0.184369168541703,0.955719759148911,0.587403472388222,0.343143423810856,0.206768026122887,0,0.106727557803444,0.606255142892519,1.66435439510497,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0.462629081407967,0.355123450626254,0.0821271560138091,1.55776328755086,0.116210378459959,0.604297247958111,1.40354529212299,1.01289087829486,0.459257792658427,2.36718518408732,7.6052160676466,0.451199612907412,0.462092022626489,0,0,0,1.13733384070897,1.70093705276516,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0.831076008928724,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0,0,0.322260734604821,0.435050081742686,0.511359764496605,0.0890320356467374,0.661139661443912,1.15314040419064,0.127612712494584,1.31505115112215,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0,0.55597265731176,0.572499546967965,0.372158369359667,0,0.571890581771475,0.255897791311334,0.42793898803392,0.318203247925937,1.56989728039846,0,0.823611089208164,0.353437207037059,0.202182481573316,3.17020642346017,1.26377536871694,0,0.974853958525138,4.22600587027022,0.136499911407986,1.97967604735198,1.13008116620243,0,0.66343897524122,1.31535265576129,0.578775534266688,0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| ||
|short_description=p9@SQSTM1 | |short_description=p9@SQSTM1 | ||
}} | }} |
Latest revision as of 09:52, 17 September 2015
Short description: | p9@SQSTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SQSTM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_ENST00000466342_5end |
EntrezGene: | SQSTM1 |
HGNC: | 11280 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.33e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.33e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.22e-07 | 315 |
mesoderm-derived structure | 2.22e-07 | 315 |
presumptive mesoderm | 2.22e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.39e-07 | 3 |
leiomyoma | 4.39e-07 | 3 |