FFCP PHASE1:Hg19::chr6:4022409..4022413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:4022409..4022413,+ | |||
|coexpression_cluster_id=C416 | |||
|description=CAGE_peak_at_chr6:4022409..4022413,+ | |description=CAGE_peak_at_chr6:4022409..4022413,+ | ||
|id=chr6:4022409..4022413,+ | |id=chr6:4022409..4022413,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.33e-36!140;CL:0000037!6.05e-36!172;CL:0000566!6.05e-36!172;CL:0000988!8.45e-33!182;CL:0002032!2.00e-32!165;CL:0000837!2.00e-32!165;CL:0002031!2.58e-32!124;CL:0002087!2.55e-31!119;CL:0000542!3.59e-17!53;CL:0000051!3.59e-17!53;CL:0000838!6.30e-17!52;CL:0000860!8.90e-16!45;CL:0002057!1.08e-15!42;CL:0000763!1.76e-15!112;CL:0000049!1.76e-15!112;CL:0000766!1.31e-14!76;CL:0000839!2.04e-14!70;CL:0000557!2.77e-14!71;CL:0002009!1.02e-13!65;CL:0002194!8.55e-13!63;CL:0000576!8.55e-13!63;CL:0000040!8.55e-13!63;CL:0000559!8.55e-13!63;CL:0000791!2.44e-09!18;CL:0000789!2.44e-09!18;CL:0002420!2.44e-09!18;CL:0002419!2.44e-09!18;CL:0000790!2.44e-09!18;CL:0000945!1.38e-08!24;CL:0000826!1.38e-08!24;CL:0000084!7.40e-08!25;CL:0000827!7.40e-08!25;CL:0000219!1.03e-07!390;CL:0000134!1.14e-07!358 | |ontology_enrichment_celltype=CL:0000738!3.33e-36!140;CL:0000037!6.05e-36!172;CL:0000566!6.05e-36!172;CL:0000988!8.45e-33!182;CL:0002032!2.00e-32!165;CL:0000837!2.00e-32!165;CL:0002031!2.58e-32!124;CL:0002087!2.55e-31!119;CL:0000542!3.59e-17!53;CL:0000051!3.59e-17!53;CL:0000838!6.30e-17!52;CL:0000860!8.90e-16!45;CL:0002057!1.08e-15!42;CL:0000763!1.76e-15!112;CL:0000049!1.76e-15!112;CL:0000766!1.31e-14!76;CL:0000839!2.04e-14!70;CL:0000557!2.77e-14!71;CL:0002009!1.02e-13!65;CL:0002194!8.55e-13!63;CL:0000576!8.55e-13!63;CL:0000040!8.55e-13!63;CL:0000559!8.55e-13!63;CL:0000791!2.44e-09!18;CL:0000789!2.44e-09!18;CL:0002420!2.44e-09!18;CL:0002419!2.44e-09!18;CL:0000790!2.44e-09!18;CL:0000945!1.38e-08!24;CL:0000826!1.38e-08!24;CL:0000084!7.40e-08!25;CL:0000827!7.40e-08!25;CL:0000219!1.03e-07!390;CL:0000134!1.14e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-16;33!CL:0002057;1.12e-16;33!CL:0000791;1.64e-14;18!CL:0000789;1.64e-14;18!CL:0002419;1.64e-14;18!CL:0000576;5.67e-14;48!CL:0000542;2.98e-13;53!CL:0000473;1.05e-12;39!CL:0000234;1.05e-12;39!CL:0002087;1.55e-12;104!CL:0000738;3.39e-12;136!CL:0000084;4.38e-12;25!CL:0000766;1.01e-09;69!CL:0000625;5.69e-09;11!CL:0000945;1.71e-08;24!CL:0000988;2.45e-07;177!CL:0000236;3.71e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.30e-52,136;CL:0002087,6.86e-45,115;CL:0002031,9.38e-45,120;CL:0000037,4.01e-43,168;CL:0000988,2.04e-40,177;CL:0002032,3.18e-37,161;CL:0000837,3.18e-37,161;CL:0000838,3.76e-23,52;CL:0000860,5.26e-23,42;CL:0002057,5.26e-23,42;CL:0000542,1.75e-22,53;CL:0000051,1.75e-22,53;CL:0000766,1.32e-21,72;CL:0000557,2.32e-21,67;CL:0002009,1.65e-20,61;CL:0000473,2.63e-20,48;CL:0000234,2.63e-20,48;CL:0000839,3.84e-19,66;CL:0002194,9.29e-19,59;CL:0000576,9.29e-19,59;CL:0000040,9.29e-19,59;CL:0000559,9.29e-19,59;CL:0000763,9.40e-16,108;CL:0000049,9.40e-16,108;CL:0000791,1.10e-14,18;CL:0000789,1.10e-14,18;CL:0002420,1.10e-14,18;CL:0002419,1.10e-14,18;CL:0000790,1.10e-14,18;CL:0000134,2.72e-13,354;CL:0002320,6.22e-13,361;CL:0000084,4.25e-12,25;CL:0000827,4.25e-12,25;CL:0000219,4.88e-12,386;CL:0000625,1.90e-09,11;CL:0000048,3.68e-09,427;CL:0000945,4.49e-09,24;CL:0000826,4.49e-09,24;CL:0000034,7.37e-09,441;CL:0000723,1.17e-08,433;CL:0000236,4.49e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;5.37e-16;42!CL:0000790;1.64e-14;18!CL:0000051;2.98e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.67e-17!112;UBERON:0002390!8.11e-17!102;UBERON:0003061!8.11e-17!102;UBERON:0002371!1.52e-13!80;UBERON:0001474!6.77e-13!86;UBERON:0002405!3.16e-12!115;UBERON:0004765!3.42e-09!101;UBERON:0001434!3.42e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-20,98;UBERON:0003061,1.17e-20,98;UBERON:0002371,3.24e-19,76;UBERON:0002193,4.01e-19,108;UBERON:0002405,5.78e-18,93;UBERON:0001474,8.58e-18,82;UBERON:0004765,4.93e-15,90;UBERON:0002384,9.14e-13,371;UBERON:0001434,2.94e-12,100 | |||
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| ||
|short_description=p@chr6:4022409..4022413,+ | |short_description=p@chr6:4022409..4022413,+ | ||
}} | }} |
Latest revision as of 01:28, 31 July 2015
Short description: | p@chr6:4022409..4022413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:4022409..4022413, + |
Coexpression cluster: | C416_CD4_Neutrophils_CD8_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-20 | 98 |
blood island | 1.17e-20 | 98 |
bone marrow | 3.24e-19 | 76 |
hemolymphoid system | 4.01e-19 | 108 |
immune system | 5.78e-18 | 93 |
bone element | 8.58e-18 | 82 |
skeletal element | 4.93e-15 | 90 |
connective tissue | 9.14e-13 | 371 |
skeletal system | 2.94e-12 | 100 |