FFCP PHASE1:Hg19::chr13:34253672..34253698,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:34253672..34253698,+
|short_description=p@chr13:34253672..34253698,+
|description=CAGE_peak_at_chr13:34253672..34253698,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:34253672..34253698,+ | |||
|description=CAGE_peak_at_chr13:34253672..34253698,+ | |||
|id=chr13:34253672..34253698,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.00e-15!45;CL:0002057!1.07e-13!42;CL:0000766!8.05e-12!76;CL:0002194!9.31e-12!63;CL:0000576!9.31e-12!63;CL:0000040!9.31e-12!63;CL:0000559!9.31e-12!63;CL:0002009!5.41e-11!65;CL:0000839!1.23e-10!70;CL:0000063!1.39e-10!578;CL:0000557!2.66e-10!71;CL:0000066!6.11e-10!254;CL:0000076!6.27e-10!62;CL:0002087!9.14e-10!119;CL:0000548!2.68e-09!679;CL:0000004!2.68e-09!679;CL:0000255!2.68e-09!679;CL:0000012!5.66e-09!682;CL:0000738!1.20e-08!140;CL:0002031!3.24e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-26;33!CL:0002057;2.54e-26;33!CL:0000473;4.10e-19;39!CL:0000234;4.10e-19;39!CL:0000576;5.36e-12;48!CL:0000766;1.11e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.55e-22,42;CL:0002057,1.55e-22,42;CL:0000473,7.59e-21,48;CL:0000234,7.59e-21,48;CL:0000766,8.47e-16,72;CL:0002194,1.91e-15,59;CL:0000576,1.91e-15,59;CL:0000040,1.91e-15,59;CL:0000559,1.91e-15,59;CL:0002009,9.43e-15,61;CL:0000839,1.45e-14,66;CL:0000557,2.92e-14,67;CL:0002031,2.32e-12,120;CL:0002087,3.14e-12,115;CL:0000738,6.51e-12,136;CL:0002032,1.51e-09,161;CL:0000837,1.51e-09,161;CL:0000763,2.67e-09,108;CL:0000049,2.67e-09,108;CL:0000037,8.29e-09,168;CL:0000988,5.97e-08,177;CL:0000182,7.86e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;4.44e-17;42 | |||
|ontology_enrichment_disease=DOID:162!1.83e-08!235;DOID:14566!8.76e-08!239;DOID:305!1.59e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.39e-10!115;UBERON:0002193!3.17e-09!112;UBERON:0002390!1.47e-08!102;UBERON:0003061!1.47e-08!102;UBERON:0002371!1.66e-08!80;UBERON:0001474!1.94e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.96e-13,76;UBERON:0001474,7.76e-12,82;UBERON:0004765,2.43e-11,90;UBERON:0002405,9.97e-10,93;UBERON:0001434,1.39e-09,100;UBERON:0002390,6.22e-09,98;UBERON:0003061,6.22e-09,98;UBERON:0002193,1.41e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,1.88831355734875,1.8890587515283,0,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,1.10799081706375,0.601633342410425,0,0,0.32389366601898,0.257575567634187,0,0.377875943688809,0,1.39457422143411,3.70051099219643,2.47765096716083,3.45230870786581,4.35473201099471,3.31075121844019,2.75796544589295,9.68227025375739,2.70852973188684,0.752969358170419,1.63743690034707,0.674170453335254,3.36692281607993,4.17207735198922,2.55734850319616,0.329851300186716,0,0,6.67481248845743,23.2627942123367,9.34233373493363,0.502497330513487,0.521482918420201,1.08594422352558,7.26479403160043,19.1504370713534,15.1901945971625,0.211255286311942,0,0,0,0,0.32145117339416,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.825354125820202,0.626984899610432,0.258416759169329,0.35576626268671,0,0.805658634218294,3.80136052859256,0.24406205754817,0.367663080345869,0,0.446498641420399,0,0.225222960966644,0,0,0.366403487860815,0,3.87780264148325,0,0,0,0,0,0,0,1.06748995729705,0,0.311211035399766,1.34710672069688,1.63461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.340296549480063,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.63647672354501,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0.474541238222193,0,0.196221465125346,0,0,0,0,0,0,1.96565443335525,0,0,0.614942192715568,0,0.439001141634502,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0.858486162094873,0,0.702012795417713,0,0,2.35174979478403,0.283550194484773,0,0,0,1.47798971368783,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,1.2162378064119,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0.116210378459959,0.846016147141356,0.200506470303285,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,1.02056223165909,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,2.11409074101617,1.02090169995667,0.708104465988849,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.38126038784765,0,0,0,1.56989728039846,0,0,0,0.202182481573316,1.58510321173008,1.68503382495592,0.48763373908959,0.974853958525138,3.16950440270266,0,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,3.44404298136984,3.36942951335251,0.443430153536676,1.60806380144872,0,0,0,0.238231775457789,0,0,0,0,0,0,2.45040215981032,0.929015875628594,0,0,0,0.59873811429845,0,0.635020748171649,0,1.68478306868075,0,0,0,0,0,0.403599414382095,0,0,0,0.223676107892416,0,0,0.556812347790485,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0.988823245360557,0,0,0.276283915531148,0,3.78394125257973,2.33861130376032,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,1.47698645169619,0.163232808159148,0.141353071433941,0,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,1.38847790668105,0.489961987071888,0.0870592065804026,0,0,0.774050650312681,0.511625219603299,0.328461828212837,0,0,0,0.411125773940253,0.19871461170299,0,0,0.400794101257669,0.213452994739353,0.799238438328521,0,0,1.71594997861965,4.17758914165634,0,0.235694034616795,0,0.104602846312333,0.509991088181609,0.577901179803038,0,0,0,1.28929632425987,0,0,0,0,0,0,0.223171457441873,0,0,0,2.6786281984456,1.81314888438566,1.75249214020881,1.57483970423598,3.13291328643403,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0.105600336519406,1.25501137532991,0.959575986597226,0,0,0,0,0,0,0,0,0,0.906496732161005,0,0,0,0,0.513260513652988,0.704815022316672,0.320362237703084,0,0,0,0.790446527591777,0.121792598380896,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,1.81978941049977,0,0.705797459094515,0,0,0,0.233713309847224,0,0,0,0,1.14420034198462,0,0,0.295710299979268,0.796483835818512,4.49803112163605,1.70789252563885,0,0.53168342911599,0,0.601030435988874,0,0,0.545545977607678,0.429642228169954,0.464033759878494,0.398095888698616,0,0,0.336749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| ||
|short_description=p@chr13:34253672..34253698,+ | |||
}} | }} |
Latest revision as of 15:44, 24 July 2015
Short description: | p@chr13:34253672..34253698, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:34253672..34253698, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.55e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-22 | 42 |
defensive cell | 7.59e-21 | 48 |
phagocyte | 7.59e-21 | 48 |
myeloid leukocyte | 8.47e-16 | 72 |
monopoietic cell | 1.91e-15 | 59 |
monocyte | 1.91e-15 | 59 |
monoblast | 1.91e-15 | 59 |
promonocyte | 1.91e-15 | 59 |
macrophage dendritic cell progenitor | 9.43e-15 | 61 |
myeloid lineage restricted progenitor cell | 1.45e-14 | 66 |
granulocyte monocyte progenitor cell | 2.92e-14 | 67 |
hematopoietic lineage restricted progenitor cell | 2.32e-12 | 120 |
nongranular leukocyte | 3.14e-12 | 115 |
leukocyte | 6.51e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.51e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-09 | 161 |
myeloid cell | 2.67e-09 | 108 |
common myeloid progenitor | 2.67e-09 | 108 |
hematopoietic stem cell | 8.29e-09 | 168 |
hematopoietic cell | 5.97e-08 | 177 |
hepatocyte | 7.86e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.96e-13 | 76 |
bone element | 7.76e-12 | 82 |
skeletal element | 2.43e-11 | 90 |
immune system | 9.97e-10 | 93 |
skeletal system | 1.39e-09 | 100 |
hematopoietic system | 6.22e-09 | 98 |
blood island | 6.22e-09 | 98 |
hemolymphoid system | 1.41e-07 | 108 |