FFCP PHASE1:Hg19::chr21:16236969..16236980,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:16236969..16236980,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr21:16236969..16236980,+ | |description=CAGE_peak_at_chr21:16236969..16236980,+ | ||
|id=chr21:16236969..16236980,+ | |id=chr21:16236969..16236980,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.32e-47!42;CL:0000860!2.18e-43!45;CL:0002194!9.19e-36!63;CL:0000576!9.19e-36!63;CL:0000040!9.19e-36!63;CL:0000559!9.19e-36!63;CL:0000839!7.84e-35!70;CL:0000766!1.07e-34!76;CL:0002009!1.57e-34!65;CL:0000557!2.81e-34!71;CL:0002087!9.23e-25!119;CL:0000738!6.50e-24!140;CL:0000763!5.76e-22!112;CL:0000049!5.76e-22!112;CL:0002031!2.11e-19!124;CL:0000988!1.41e-18!182;CL:0000037!2.17e-18!172;CL:0000566!2.17e-18!172;CL:0000842!2.72e-17!3;CL:0000080!8.46e-15!6;CL:0002032!1.15e-14!165;CL:0000837!1.15e-14!165;CL:0000224!4.25e-13!4;CL:0000134!1.38e-10!358;CL:0002320!2.96e-10!365;CL:0000219!4.42e-09!390;CL:0000034!8.37e-09!444;CL:0000048!1.77e-08!430;CL:0000723!2.89e-08!436 | |ontology_enrichment_celltype=CL:0002057!8.32e-47!42;CL:0000860!2.18e-43!45;CL:0002194!9.19e-36!63;CL:0000576!9.19e-36!63;CL:0000040!9.19e-36!63;CL:0000559!9.19e-36!63;CL:0000839!7.84e-35!70;CL:0000766!1.07e-34!76;CL:0002009!1.57e-34!65;CL:0000557!2.81e-34!71;CL:0002087!9.23e-25!119;CL:0000738!6.50e-24!140;CL:0000763!5.76e-22!112;CL:0000049!5.76e-22!112;CL:0002031!2.11e-19!124;CL:0000988!1.41e-18!182;CL:0000037!2.17e-18!172;CL:0000566!2.17e-18!172;CL:0000842!2.72e-17!3;CL:0000080!8.46e-15!6;CL:0002032!1.15e-14!165;CL:0000837!1.15e-14!165;CL:0000224!4.25e-13!4;CL:0000134!1.38e-10!358;CL:0002320!2.96e-10!365;CL:0000219!4.42e-09!390;CL:0000034!8.37e-09!444;CL:0000048!1.77e-08!430;CL:0000723!2.89e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0002393;5.10e-24;6!CL:0002397;5.10e-24;6!CL:0000226;2.06e-21;3!CL:0000842;2.06e-21;3!CL:0000473;1.61e-15;39!CL:0000234;1.61e-15;39!CL:0000860;2.33e-14;33!CL:0002057;2.33e-14;33!CL:0000766;3.20e-14;69!CL:0000576;4.98e-14;48!CL:0002087;2.71e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.21e-31,48;CL:0000234,8.21e-31,48;CL:0000860,1.17e-28,42;CL:0002057,1.17e-28,42;CL:0002194,1.70e-24,59;CL:0000576,1.70e-24,59;CL:0000040,1.70e-24,59;CL:0000559,1.70e-24,59;CL:0002009,1.11e-23,61;CL:0000839,7.46e-22,66;CL:0000226,1.59e-21,3;CL:0000842,1.59e-21,3;CL:0000557,1.61e-21,67;CL:0000766,5.45e-20,72;CL:0002087,6.46e-18,115;CL:0002393,3.09e-16,9;CL:0002397,3.09e-16,9;CL:0000738,5.21e-15,136;CL:0000763,4.28e-13,108;CL:0000049,4.28e-13,108;CL:0000037,5.87e-12,168;CL:0002031,1.06e-11,120;CL:0000988,2.70e-11,177;CL:0002032,1.74e-08,161;CL:0000837,1.74e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;5.34e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.84e-32!102;UBERON:0003061!2.84e-32!102;UBERON:0002371!6.65e-30!80;UBERON:0002193!6.63e-29!112;UBERON:0001474!1.72e-27!86;UBERON:0004765!6.51e-25!101;UBERON:0001434!6.51e-25!101;UBERON:0002405!2.39e-19!115;UBERON:0002204!4.56e-13!167;UBERON:0003081!2.80e-12!216;UBERON:0002384!8.42e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.64e-21,98;UBERON:0003061,3.64e-21,98;UBERON:0002193,3.93e-19,108;UBERON:0002371,6.59e-19,76;UBERON:0001474,1.77e-17,82;UBERON:0004765,7.27e-16,90;UBERON:0002405,2.49e-15,93;UBERON:0001434,3.32e-14,100;UBERON:0003081,1.05e-09,203;UBERON:0002204,3.80e-08,167 | |||
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|short_description=p@chr21:16236969..16236980,+ | |short_description=p@chr21:16236969..16236980,+ | ||
}} | }} |
Latest revision as of 16:45, 28 July 2015
Short description: | p@chr21:16236969..16236980, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:16236969..16236980, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.21e-31 | 48 |
phagocyte | 8.21e-31 | 48 |
classical monocyte | 1.17e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-28 | 42 |
monopoietic cell | 1.70e-24 | 59 |
monocyte | 1.70e-24 | 59 |
monoblast | 1.70e-24 | 59 |
promonocyte | 1.70e-24 | 59 |
macrophage dendritic cell progenitor | 1.11e-23 | 61 |
myeloid lineage restricted progenitor cell | 7.46e-22 | 66 |
single nucleate cell | 1.59e-21 | 3 |
mononuclear cell | 1.59e-21 | 3 |
granulocyte monocyte progenitor cell | 1.61e-21 | 67 |
myeloid leukocyte | 5.45e-20 | 72 |
nongranular leukocyte | 6.46e-18 | 115 |
intermediate monocyte | 3.09e-16 | 9 |
CD14-positive, CD16-positive monocyte | 3.09e-16 | 9 |
leukocyte | 5.21e-15 | 136 |
myeloid cell | 4.28e-13 | 108 |
common myeloid progenitor | 4.28e-13 | 108 |
hematopoietic stem cell | 5.87e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 1.06e-11 | 120 |
hematopoietic cell | 2.70e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.64e-21 | 98 |
blood island | 3.64e-21 | 98 |
hemolymphoid system | 3.93e-19 | 108 |
bone marrow | 6.59e-19 | 76 |
bone element | 1.77e-17 | 82 |
skeletal element | 7.27e-16 | 90 |
immune system | 2.49e-15 | 93 |
skeletal system | 3.32e-14 | 100 |
lateral plate mesoderm | 1.05e-09 | 203 |
musculoskeletal system | 3.80e-08 | 167 |