FFCP PHASE1:Hg19::chr21:27941000..27941004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:27941000..27941004,+ | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_at_chr21:27941000..27941004,+ | |description=CAGE_peak_at_chr21:27941000..27941004,+ | ||
|id=chr21:27941000..27941004,+ | |id=chr21:27941000..27941004,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.49e-14!10;DOID:3095!4.79e-07!22;DOID:2994!4.79e-07!22;DOID:169!7.17e-07!6 | |ontology_enrichment_disease=DOID:171!2.49e-14!10;DOID:3095!4.79e-07!22;DOID:2994!4.79e-07!22;DOID:169!7.17e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000988!1.91e-44!3;UBERON:0002680!2.16e-33!9;UBERON:0001895!2.16e-33!9;UBERON:0010092!2.16e-33!9;UBERON:0004733!2.74e-25!12;UBERON:0002028!2.74e-25!12;UBERON:0007277!2.74e-25!12;UBERON:0004732!2.05e-23!13;UBERON:0003076!2.05e-20!15;UBERON:0003057!2.05e-20!15;UBERON:0002148!7.67e-18!2;UBERON:0009662!7.67e-18!2;UBERON:0001873!9.07e-18!2;UBERON:0010122!9.07e-18!2;UBERON:0002298!2.01e-17!8;UBERON:0002308!1.13e-15!9;UBERON:0000125!1.13e-15!9;UBERON:0006331!2.31e-12!3;UBERON:0005383!2.59e-12!3;UBERON:0005382!2.59e-12!3;UBERON:0001049!1.22e-09!57;UBERON:0005068!1.22e-09!57;UBERON:0006241!1.22e-09!57;UBERON:0007135!1.22e-09!57;UBERON:0000369!1.44e-09!4;UBERON:0002435!1.44e-09!4;UBERON:0000204!1.44e-09!4;UBERON:0010082!1.44e-09!4;UBERON:0002346!1.67e-09!90;UBERON:0002616!2.45e-09!59;UBERON:0000073!5.99e-09!94;UBERON:0001016!5.99e-09!94;UBERON:0000013!5.35e-08!5;UBERON:0002410!5.35e-08!5;UBERON:0000955!5.73e-08!69;UBERON:0006238!5.73e-08!69;UBERON:0000924!3.85e-07!173;UBERON:0006601!3.85e-07!173;UBERON:0001017!8.30e-07!82;UBERON:0002037!8.97e-07!6;UBERON:0006215!8.97e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p@chr21:27941000..27941004,+ | |short_description=p@chr21:27941000..27941004,+ | ||
}} | }} |
Latest revision as of 17:05, 28 July 2015
Short description: | p@chr21:27941000..27941004, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:27941000..27941004, + |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |