FFCP PHASE1:Hg19::chr6:86352982..86353073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10492 | |EntrezGene=10492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16918 | |HGNC=16918 | ||
|TSSclassifier=strong | |||
|UniProt=O60506,Q59GL1 | |UniProt=O60506,Q59GL1 | ||
|association_with_transcript=0bp_to_ENST00000369622,NM_001159677,NM_006372,uc003pkv.2,uc003pkw.2,uc003pkx.2,uc003pky.2,uc003pla.2_5end | |association_with_transcript=0bp_to_ENST00000369622,NM_001159677,NM_006372,uc003pkv.2,uc003pkw.2,uc003pkx.2,uc003pky.2,uc003pla.2_5end | ||
|cluster_id=chr6:86352982..86353073,- | |||
|description=CAGE_peak_1_at_SYNCRIP_5end | |description=CAGE_peak_1_at_SYNCRIP_5end | ||
|id=chr6:86352982..86353073,- | |id=chr6:86352982..86353073,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.25e-12!115;UBERON:0000922!5.37e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.75e-12,114;UBERON:0011216,1.33e-07,223;UBERON:0010314,7.74e-07,132 | |||
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890419427,30.7745752611104 | ||
|short_description=p1@SYNCRIP | |short_description=p1@SYNCRIP | ||
}} | }} |
Latest revision as of 01:31, 20 September 2015
Short description: | p1@SYNCRIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYNCRIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369622, NM_001159677, NM_006372, uc003pkv.2, uc003pkw.2, uc003pkx.2, uc003pky.2, uc003pla.2_5end |
EntrezGene: | SYNCRIP |
HGNC: | 16918 |
UniProt: | O60506Q59GL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.75e-12 | 114 |
organ system subdivision | 1.33e-07 | 223 |
structure with developmental contribution from neural crest | 7.74e-07 | 132 |