FFCP PHASE1:Hg19::chr13:45010776..45010795,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:45010776..45010795,-
|short_description=p13@TSC22D1
|description=CAGE_peak_13_at_TSC22D1_5end
|association_with_transcript=-44bp_to_ENST00000487881_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8848 | |EntrezGene=8848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16826 | |HGNC=16826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000487881_5end | |||
|cluster_id=chr13:45010776..45010795,- | |||
|description=CAGE_peak_13_at_TSC22D1_5end | |||
|id=chr13:45010776..45010795,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.50e-13;5!CL:0000163;3.94e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.71e-13,5;CL:0002028,7.71e-13,5;CL:0000163,3.74e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-31!115;UBERON:0002020!1.15e-12!34;UBERON:0003528!1.15e-12!34;UBERON:0002619!3.47e-12!22;UBERON:0001869!1.79e-11!32;UBERON:0001893!2.04e-11!34;UBERON:0002791!5.67e-11!33;UBERON:0001950!8.54e-11!20;UBERON:0001049!9.14e-11!57;UBERON:0005068!9.14e-11!57;UBERON:0006241!9.14e-11!57;UBERON:0007135!9.14e-11!57;UBERON:0000956!1.77e-10!25;UBERON:0000203!1.77e-10!25;UBERON:0003080!9.63e-10!42;UBERON:0001017!2.52e-09!82;UBERON:0002780!2.91e-09!41;UBERON:0001890!2.91e-09!41;UBERON:0006240!2.91e-09!41;UBERON:0005743!4.41e-09!86;UBERON:0002616!4.88e-09!59;UBERON:0003075!1.33e-08!86;UBERON:0007284!1.33e-08!86;UBERON:0000468!2.09e-08!659;UBERON:0000073!2.43e-08!94;UBERON:0001016!2.43e-08!94;UBERON:0000922!2.53e-08!612;UBERON:0000467!3.01e-08!625;UBERON:0000480!4.01e-08!626;UBERON:0000955!4.34e-08!69;UBERON:0006238!4.34e-08!69;UBERON:0000923!5.38e-08!604;UBERON:0005291!5.38e-08!604;UBERON:0006598!5.38e-08!604;UBERON:0002532!5.38e-08!604;UBERON:0002346!6.59e-08!90;UBERON:0002050!7.10e-08!605;UBERON:0005423!7.10e-08!605;UBERON:0003056!2.98e-07!61;UBERON:0004121!8.79e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.42e-16;15!UBERON:0000179;2.42e-16;15!UBERON:0000463;2.42e-16;15!UBERON:0002619;3.03e-12;22!UBERON:0002791;9.98e-11;32!UBERON:0001950;1.21e-10;20!UBERON:0000956;1.21e-10;25!UBERON:0000203;1.21e-10;25!UBERON:0003528;4.46e-10;34!UBERON:0002020;4.46e-10;34!UBERON:0001893;6.54e-10;34!UBERON:0001871;3.69e-09;6!UBERON:0002771;4.48e-09;2!UBERON:0001869;4.87e-09;32!UBERON:0005631;6.50e-07;10!UBERON:0000158;6.50e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.78e-16,15;UBERON:0000179,1.78e-16,15;UBERON:0000463,1.78e-16,15;UBERON:0007023,2.13e-15,114;UBERON:0002619,3.01e-12,22;UBERON:0002791,5.99e-12,32;UBERON:0003528,3.87e-11,34;UBERON:0002020,3.87e-11,34;UBERON:0001893,3.87e-11,34;UBERON:0001950,1.17e-10,20;UBERON:0000956,1.21e-10,25;UBERON:0000203,1.21e-10,25;UBERON:0001869,6.45e-10,32;UBERON:0002771,2.72e-09,2;UBERON:0001871,3.60e-09,6;UBERON:0003056,4.17e-09,61;UBERON:0002780,6.44e-09,41;UBERON:0001890,6.44e-09,41;UBERON:0003080,6.44e-09,41;UBERON:0006240,6.44e-09,41;UBERON:0003075,3.71e-08,82;UBERON:0007284,3.71e-08,82;UBERON:0002346,1.26e-07,86;UBERON:0001049,3.27e-07,56;UBERON:0005068,3.27e-07,56;UBERON:0006241,3.27e-07,56;UBERON:0007135,3.27e-07,56 | |||
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| ||
|short_description=p13@TSC22D1 | |||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p13@TSC22D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TSC22D1_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000487881_5end |
EntrezGene: | TSC22D1 |
HGNC: | 16826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.71e-13 | 5 |
basophil mast progenitor cell | 7.71e-13 | 5 |
endocrine cell | 3.74e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 1.78e-16 | 15 |
haemolymphatic fluid | 1.78e-16 | 15 |
organism substance | 1.78e-16 | 15 |
adult organism | 2.13e-15 | 114 |
regional part of cerebral cortex | 3.01e-12 | 22 |
regional part of telencephalon | 5.99e-12 | 32 |
brain grey matter | 3.87e-11 | 34 |
gray matter | 3.87e-11 | 34 |
telencephalon | 3.87e-11 | 34 |
neocortex | 1.17e-10 | 20 |
cerebral cortex | 1.21e-10 | 25 |
pallium | 1.21e-10 | 25 |
cerebral hemisphere | 6.45e-10 | 32 |
middle temporal gyrus | 2.72e-09 | 2 |
temporal lobe | 3.60e-09 | 6 |
pre-chordal neural plate | 4.17e-09 | 61 |
regional part of forebrain | 6.44e-09 | 41 |
forebrain | 6.44e-09 | 41 |
anterior neural tube | 6.44e-09 | 41 |
future forebrain | 6.44e-09 | 41 |
neural plate | 3.71e-08 | 82 |
presumptive neural plate | 3.71e-08 | 82 |
neurectoderm | 1.26e-07 | 86 |
neural tube | 3.27e-07 | 56 |
neural rod | 3.27e-07 | 56 |
future spinal cord | 3.27e-07 | 56 |
neural keel | 3.27e-07 | 56 |