FFCP PHASE1:Hg19::chr7:872107..872145,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23353 | |EntrezGene=23353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18587 | |HGNC=18587 | ||
|TSSclassifier=strong | |||
|UniProt=O94901,E9PF23,E9PHI4 | |UniProt=O94901,E9PF23,E9PHI4 | ||
|association_with_transcript=0bp_to_ENST00000297445,ENST00000340926,ENST00000401592,ENST00000403868,ENST00000405266,ENST00000413171,ENST00000425407,ENST00000467483,ENST00000483996,NM_001130965_5end | |association_with_transcript=0bp_to_ENST00000297445,ENST00000340926,ENST00000401592,ENST00000403868,ENST00000405266,ENST00000413171,ENST00000425407,ENST00000467483,ENST00000483996,NM_001130965_5end | ||
|cluster_id=chr7:872107..872145,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_2_at_SUN1_5end | |description=CAGE_peak_2_at_SUN1_5end | ||
|id=chr7:872107..872145,+ | |id=chr7:872107..872145,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.27e-09!254;CL:0000076!1.23e-07!62 | |ontology_enrichment_celltype=CL:0000066!9.27e-09!254;CL:0000076!1.23e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002144;2.33e-08;3!CL:0000077;8.42e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,4.70e-09,63;CL:0002144,1.79e-08,3;CL:0000077,4.75e-08,19;CL:0000066,5.10e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.32e-14!106;DOID:0050687!1.37e-10!143;DOID:1749!2.72e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.44e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.01e-08!14;UBERON:0000158!2.01e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.02e-09;10!UBERON:0000158;2.02e-09;10!UBERON:0001723;2.33e-08;3!UBERON:0010523;2.33e-08;3!UBERON:0001915;2.33e-08;3!UBERON:0001033;2.33e-08;3!UBERON:0001982;2.33e-08;3!UBERON:0000974;3.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.28e-08,14;UBERON:0000158,1.28e-08,14;UBERON:0010523,1.79e-08,3;UBERON:0001915,1.79e-08,3;UBERON:0001982,1.79e-08,3;UBERON:0001723,2.51e-08,3;UBERON:0001033,2.51e-08,3;UBERON:0010056,2.51e-08,3;UBERON:0004871,3.95e-08,8 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0.245733936501509,0,1.52908960491121,0.527533956456907,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.619264493264304,0,0.30120591877825,0,0.154934401160603,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,1.77901850772711,0,0,1.14950487990897,0.661044872784862,0,0.569212969109448,0,0.764546456250458,0,0,0,0.983548850569165,0,1.85041349099558,0,0.32592226663359,0,1.94826728407911,0.557052284425868,0.883817722424512,1.99380505125259,0.270803863765016,0.640456598628376,0.390178042679635,0.164437904603676,0,0,0.296573126324121,1.07016331235885,0,0.453237370790265,0.766440987203842,1.71813722741315,0.759059076058509,0.637130828648193,0,0,0,0.127986611154418,2.49861453104692,0.473554504088034,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0.289693037921647,1.5905718941022,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0.71153252537342,0,1.61131726843659,1.52054421143703,2.19655851793353,0,0,0.0892997282840798,0,0.675668882899933,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.441175890929576,0.217879444092406,0,0.269662616320329,0.392442930250692,0.38474715694639,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.447792613514241,0.290633938513962,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0.531876233169741,1.04007436911366,0,1.41849132023278,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0.394061520403854,0,0.513372145118994,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0.117141414992713,0,0,0,0,0.368738337083406,0.173767228936166,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,0.30239029332968,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0.601519410909855,0,0,0,0,0,0,0,0,0.211103257785751,2.27466768141793,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,2.16941611240793,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0,0.422215270595328,0.329294892959902,0,0,0.288666338176536,1.34060455107157,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0.490080431962063,0,0,0.0711418433484141,0.159426272728822,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0.284136146806413,3.81991175580304,0.890894042497916,5.83605333988541,0,0,0.779160935160341,0.659215496907038,0.422250816255987,0.796991953004279,0.552567831062295,0,0.20453736500431,0,0,2.15684042753584,0.716084698702437,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0.682760689712998,4.06805840468426,0,0,0.291604613383254,0,0,0.241192877250816,1.52581736317083,0,0.295547618953547,0.438770794307945,0.21787692703798,0.697118721393016,1.23120413606075,0,0.46112780877612,0,0.217294743844016,2.87101043758728,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0.421996129056054,0.489698424477443,0.141353071433941,0,0,0.353830258013357,1.22206028986725,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0.063186579628488,1.05226393590145,0,0,0.661983911750998,0.313932918407225,0,0,0,1.04135843001079,0.783939179315021,2.61177619741208,0.34945333648406,6.87944129886466,0.0967563312890851,0.219267951258557,0.246346371159628,0.290967049465258,0,0.451961481561065,0.548167698587004,0,0.0633107959558787,0.586654148204409,0.400794101257669,0.426905989478705,5.79447867788178,0.72045208577053,0.458146384663663,0,0.576219191952599,1.61528296235062,0.707082103850386,0.271808412147228,0.523014231561666,0.101998217636322,0.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| 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| ||
|short_description=p2@SUN1 | |short_description=p2@SUN1 | ||
}} | }} |
Latest revision as of 21:15, 19 September 2015
Short description: | p2@SUN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SUN1_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000297445, ENST00000340926, ENST00000401592, ENST00000403868, ENST00000405266, ENST00000413171, ENST00000425407, ENST00000467483, ENST00000483996, NM_001130965_5end |
EntrezGene: | SUN1 |
HGNC: | 18587 |
UniProt: | O94901E9PF23E9PHI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 4.70e-09 | 63 |
capillary endothelial cell | 1.79e-08 | 3 |
mesothelial cell | 4.75e-08 | 19 |
epithelial cell | 5.10e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.28e-08 | 14 |
membranous layer | 1.28e-08 | 14 |
microcirculatory vessel | 1.79e-08 | 3 |
endothelium of capillary | 1.79e-08 | 3 |
capillary | 1.79e-08 | 3 |
tongue | 2.51e-08 | 3 |
gustatory system | 2.51e-08 | 3 |
future tongue | 2.51e-08 | 3 |
somatic layer of lateral plate mesoderm | 3.95e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.44e-09 | 106 |