FFCP PHASE1:Hg19::chr14:106938440..106938454,+: Difference between revisions
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|id=chr14:106938440..106938454,+
|short_description=p3@LINC00221
|description=CAGE_peak_3_at_LINC00221_5end
|association_with_transcript=0bp_to_ENST00000433371,ENST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338005 | |EntrezGene=338005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=20169 | |HGNC=20169 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000433371,ENST00000449670,NR_027457,uc001ysy.2_5end | |||
|cluster_id=chr14:106938440..106938454,+ | |||
|description=CAGE_peak_3_at_LINC00221_5end | |||
|id=chr14:106938440..106938454,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.87e-11!7;CL:0000586!2.87e-11!7;CL:0000080!1.98e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000333;9.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!9.10e-13!143;DOID:162!5.19e-12!235;DOID:14566!1.26e-11!239;DOID:1036!5.16e-10!8;DOID:3095!1.63e-07!22;DOID:2994!1.63e-07!22;DOID:1325!5.58e-07!7;DOID:3904!5.58e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.71e-11;8!DOID:0060085;9.49e-11;1!DOID:3165;9.49e-11;1!DOID:0060121;9.49e-11;1!DOID:2438;9.49e-11;1!DOID:4418;9.49e-11;1!DOID:169;1.96e-07;6!DOID:3095;3.61e-07;22!DOID:2994;3.61e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.50e-11,8;DOID:0060085,5.57e-11,1;DOID:3165,5.57e-11,1;DOID:0060121,5.57e-11,1;DOID:2438,5.57e-11,1;DOID:4418,5.57e-11,1;DOID:0050687,7.22e-11,143;DOID:162,2.49e-10,235;DOID:14566,4.69e-10,239;DOID:169,2.09e-07,6;DOID:3095,3.44e-07,22;DOID:2994,3.44e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.49e-11;1!UBERON:0007195;9.49e-11;1!UBERON:0009842;9.49e-11;1!UBERON:0003704;9.49e-11;1!UBERON:0001171;9.49e-11;1!UBERON:0001172;9.49e-11;1!UBERON:0000013;9.35e-09;5!UBERON:0002410;9.35e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,9.97e-11,1;UBERON:0009842,9.97e-11,1;UBERON:0003704,9.97e-11,1;UBERON:0001171,9.97e-11,1;UBERON:0001172,9.97e-11,1;UBERON:0007195,1.46e-10,1;UBERON:0000013,1.01e-08,5;UBERON:0002410,1.01e-08,5 | |||
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|short_description=p3@LINC00221 | |||
}} | }} |
Latest revision as of 22:41, 18 September 2015
Short description: | p3@LINC00221 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LINC00221_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433371, ENST00000449670, NR_027457, uc001ysy.2_5end |
EntrezGene: | LINC00221 |
HGNC: | 20169 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 9.97e-11 | 1 |
acinus | 9.97e-11 | 1 |
intrahepatic bile duct | 9.97e-11 | 1 |
portal lobule | 9.97e-11 | 1 |
hepatic acinus | 9.97e-11 | 1 |
stroma of bone marrow | 1.46e-10 | 1 |
sympathetic nervous system | 1.01e-08 | 5 |
autonomic nervous system | 1.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.50e-11 | 8 |
organ system benign neoplasm | 5.57e-11 | 1 |
skin benign neoplasm | 5.57e-11 | 1 |
integumentary system benign neoplasm | 5.57e-11 | 1 |
dermis tumor | 5.57e-11 | 1 |
cutaneous fibrous histiocytoma | 5.57e-11 | 1 |
cell type cancer | 7.22e-11 | 143 |
cancer | 2.49e-10 | 235 |
disease of cellular proliferation | 4.69e-10 | 239 |
neuroendocrine tumor | 2.09e-07 | 6 |
germ cell and embryonal cancer | 3.44e-07 | 22 |
germ cell cancer | 3.44e-07 | 22 |