FFCP PHASE1:Hg19::chr2:161127815..161127825,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3694 | |EntrezGene=3694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6161 | |HGNC=6161 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_ENST00000477514_5end | |association_with_transcript=-55bp_to_ENST00000477514_5end | ||
|cluster_id=chr2:161127815..161127825,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_8_at_ITGB6_5end | |description=CAGE_peak_8_at_ITGB6_5end | ||
|id=chr2:161127815..161127825,- | |id=chr2:161127815..161127825,- | ||
|ontology_enrichment_celltype=CL:0000077!6.44e-09!19 | |ontology_enrichment_celltype=CL:0000077!6.44e-09!19 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.02e-13;1!UBERON:0000358;9.92e-13;1!UBERON:0010227;9.92e-13;1!UBERON:0004140;3.08e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.41e-23;2!DOID:178;1.56e-12;1!DOID:326;1.56e-12;1!DOID:3978;1.56e-12;1!DOID:3394;1.56e-12;1!DOID:5844;1.56e-12;1!DOID:1287;2.76e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.26e-23,2;DOID:178,1.40e-12,1;DOID:326,1.40e-12,1;DOID:3978,1.40e-12,1;DOID:3394,1.40e-12,1;DOID:5844,1.40e-12,1;DOID:1287,2.61e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.92e-10!11;UBERON:0003103!1.34e-08!69;UBERON:0007100!1.52e-08!27;UBERON:0007023!9.88e-08!115;UBERON:0004151!1.84e-07!3;UBERON:0003978!3.13e-07!3;UBERON:0009751!3.13e-07!3;UBERON:0000946!3.13e-07!3;UBERON:0002523!3.13e-07!3;UBERON:0005983!3.13e-07!3;UBERON:0002165!3.13e-07!3;UBERON:0002062!3.13e-07!3;UBERON:0007280!3.13e-07!3;UBERON:0000478!4.99e-07!24;UBERON:0005631!5.07e-07!14;UBERON:0000158!5.07e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.07e-21;25!UBERON:0004151;3.17e-16;3!UBERON:0002084;7.02e-13;1!UBERON:0002082;7.02e-13;1!UBERON:0002079;9.92e-13;1!UBERON:0002146;1.56e-12;1!UBERON:0005623;1.56e-12;1!UBERON:0001000;3.08e-12;1!UBERON:0002171;3.08e-12;1!UBERON:0002426;3.08e-12;1!UBERON:0003831;3.08e-12;1!UBERON:0003898;3.08e-12;1!UBERON:0004830;3.08e-12;1!UBERON:0006518;3.08e-12;1!UBERON:0008949;3.08e-12;1!UBERON:0003830;3.08e-12;1!UBERON:0005175;3.08e-12;1!UBERON:0001774;3.08e-12;1!UBERON:0000101;3.08e-12;1!UBERON:0001103;3.08e-12;1!UBERON:0005352;3.08e-12;1!UBERON:0002167;3.08e-12;1!UBERON:0000948;2.11e-08;22!UBERON:0002081;5.41e-07;2!UBERON:0005090;9.53e-07;2!UBERON:0001630;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.09e-20,27;UBERON:0004151,3.43e-16,3;UBERON:0002084,7.03e-13,1;UBERON:0002082,7.03e-13,1;UBERON:0010226,7.03e-13,1;UBERON:0002079,1.11e-12,1;UBERON:0002146,1.75e-12,1;UBERON:0005623,1.75e-12,1;UBERON:0002426,1.96e-12,1;UBERON:0003831,1.96e-12,1;UBERON:0003898,1.96e-12,1;UBERON:0004830,1.96e-12,1;UBERON:0003830,1.96e-12,1;UBERON:0005175,1.96e-12,1;UBERON:0001774,1.96e-12,1;UBERON:0001103,1.96e-12,1;UBERON:0010084,1.96e-12,1;UBERON:0002171,2.75e-12,1;UBERON:0006518,2.75e-12,1;UBERON:0008949,2.75e-12,1;UBERON:0000101,2.75e-12,1;UBERON:0002167,2.75e-12,1;UBERON:0001000,3.08e-12,1;UBERON:0005352,3.08e-12,1;UBERON:0007023,2.51e-10,114;UBERON:0000948,1.01e-07,24;UBERON:0005498,1.01e-07,24;UBERON:0004140,1.01e-07,24;UBERON:0009881,1.01e-07,24;UBERON:0004141,1.01e-07,24;UBERON:0003084,1.01e-07,24;UBERON:0007005,1.01e-07,24;UBERON:0004139,1.01e-07,24;UBERON:0004291,1.01e-07,24;UBERON:0003103,1.78e-07,68;UBERON:0002081,5.73e-07,2;UBERON:0010227,5.73e-07,2;UBERON:0005090,7.61e-07,2;UBERON:0001630,7.61e-07,2 | |||
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| ||
|short_description=p8@ITGB6 | |short_description=p8@ITGB6 | ||
}} | }} |
Latest revision as of 19:50, 17 September 2015
Short description: | p8@ITGB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ITGB6_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -55bp_to_ENST00000477514_5end |
EntrezGene: | ITGB6 |
HGNC: | 6161 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.26e-23 | 2 |
vascular disease | 1.40e-12 | 1 |
ischemia | 1.40e-12 | 1 |
extrinsic cardiomyopathy | 1.40e-12 | 1 |
myocardial ischemia | 1.40e-12 | 1 |
myocardial infarction | 1.40e-12 | 1 |
cardiovascular system disease | 2.61e-12 | 4 |