FFCP PHASE1:Hg19::chr2:182545282..182545294,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4760 | |EntrezGene=4760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7762 | |HGNC=7762 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000496876_5end | |association_with_transcript=-8bp_to_ENST00000496876_5end | ||
|cluster_id=chr2:182545282..182545294,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_NEUROD1_5end | |description=CAGE_peak_2_at_NEUROD1_5end | ||
|id=chr2:182545282..182545294,- | |id=chr2:182545282..182545294,- | ||
|ontology_enrichment_celltype=CL:0000047!2.77e-10!8;CL:0002319!2.20e-08!25;CL:0000242!2.46e-07!2 | |ontology_enrichment_celltype=CL:0000047!2.77e-10!8;CL:0002319!2.20e-08!25;CL:0000242!2.46e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.30e-08;25!CL:0000540;2.78e-08;6!CL:0000404;2.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.53e-10,8;CL:0002319,2.32e-08,25;CL:0000540,2.62e-08,6;CL:0000031,2.62e-08,6;CL:0000404,2.62e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.01e-17;3!CL:0000031;2.78e-08;6!UBERON:0006601;2.37e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.61e-45,81;UBERON:0002619,1.08e-44,22;UBERON:0001016,5.91e-43,89;UBERON:0000956,3.66e-39,25;UBERON:0000203,3.66e-39,25;UBERON:0001950,1.40e-36,20;UBERON:0000073,3.00e-36,53;UBERON:0002616,3.00e-36,53;UBERON:0000955,5.72e-36,68;UBERON:0006238,5.72e-36,68;UBERON:0001049,4.33e-34,56;UBERON:0005068,4.33e-34,56;UBERON:0006241,4.33e-34,56;UBERON:0007135,4.33e-34,56;UBERON:0002780,2.66e-30,41;UBERON:0001890,2.66e-30,41;UBERON:0003080,2.66e-30,41;UBERON:0006240,2.66e-30,41;UBERON:0002791,3.63e-30,32;UBERON:0001869,3.63e-30,32;UBERON:0003528,2.95e-28,34;UBERON:0002020,2.95e-28,34;UBERON:0001893,2.95e-28,34;UBERON:0001871,1.20e-24,6;UBERON:0003075,2.28e-24,82;UBERON:0007284,2.28e-24,82;UBERON:0002346,5.08e-23,86;UBERON:0003056,6.17e-22,61;UBERON:0004121,2.52e-21,171;UBERON:0000924,2.52e-21,171;UBERON:0006601,2.52e-21,171;UBERON:0010371,3.73e-20,104;UBERON:0000349,2.09e-16,5;UBERON:0011216,3.64e-16,223;UBERON:0010314,2.34e-13,132;UBERON:0001905,8.61e-12,2;UBERON:0002757,8.61e-12,2;UBERON:0010134,8.61e-12,2;UBERON:0005408,8.61e-12,2;UBERON:0001899,8.61e-12,2;UBERON:0007023,1.20e-11,114;UBERON:0001954,3.69e-11,2;UBERON:0003022,3.69e-11,2;UBERON:0002421,3.69e-11,2;UBERON:0002600,3.69e-11,2;UBERON:0001876,4.76e-11,2;UBERON:0002771,6.44e-11,2;UBERON:0002021,1.56e-09,5;UBERON:0002037,8.79e-09,6;UBERON:0006215,8.79e-09,6;UBERON:0000200,5.62e-08,6;UBERON:0000025,9.66e-08,192;UBERON:0004733,3.06e-07,12;UBERON:0002028,3.06e-07,12;UBERON:0007277,3.06e-07,12 | |||
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|short_description=p2@NEUROD1 | |short_description=p2@NEUROD1 | ||
}} | }} |
Latest revision as of 21:24, 18 September 2015
Short description: | p2@NEUROD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEUROD1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -8bp_to_ENST00000496876_5end |
EntrezGene: | NEUROD1 |
HGNC: | 7762 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.53e-10 | 8 |
neural cell | 2.32e-08 | 25 |
neuron | 2.62e-08 | 6 |
neuroblast | 2.62e-08 | 6 |
electrically signaling cell | 2.62e-08 | 6 |