FFCP PHASE1:Hg19::chr8:40010804..40010814,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56892 | |EntrezGene=56892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1357 | |HGNC=1357 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR00 | |UniProt=Q9NR00 | ||
|association_with_transcript=-172bp_to_NM_020130_5end | |association_with_transcript=-172bp_to_NM_020130_5end | ||
|cluster_id=chr8:40010804..40010814,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_C8orf4_5end | |description=CAGE_peak_3_at_C8orf4_5end | ||
|id=chr8:40010804..40010814,+ | |id=chr8:40010804..40010814,+ | ||
|ontology_enrichment_celltype=CL:0002536!2.16e-08!2 | |ontology_enrichment_celltype=CL:0002536!2.16e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002188;5.15e-21;5!CL:1000746;1.91e-15;7!CL:1000612;1.91e-15;7!CL:0002681;1.33e-09;12!CL:0002584;1.33e-09;12!CL:1000449;5.93e-08;15!CL:1000497;3.58e-07;17!CL:0002518;3.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,5.15e-21,5;CL:1000746,1.91e-15,7;CL:1000612,1.91e-15,7;CL:0002681,1.33e-09,12;CL:0002584,1.33e-09,12;CL:1000449,5.93e-08,15;CL:1000497,3.58e-07,17;CL:0002518,3.58e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.31e-10!155;UBERON:0001555!1.31e-10!155;UBERON:0007026!1.31e-10!155;UBERON:0004119!3.80e-10!169;UBERON:0000925!3.80e-10!169;UBERON:0006595!3.80e-10!169;UBERON:0000305!1.13e-08!7;UBERON:0004921!1.73e-08!129;UBERON:0004185!1.73e-08!129;UBERON:0000077!1.38e-07!130;UBERON:0004871!1.38e-07!8;UBERON:0001255!1.72e-07!2;UBERON:0001556!1.72e-07!2;UBERON:0005177!3.37e-07!107;UBERON:0005911!3.58e-07!82;UBERON:0000060!5.38e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.21e-21;4!UBERON:0000074;1.91e-15;7!UBERON:0001229;1.91e-15;7!UBERON:0001225;1.33e-09;12!UBERON:0008987;1.33e-09;12!UBERON:0001135;5.55e-08;15!UBERON:0001851;5.93e-08;15!UBERON:0006555;5.93e-08;15!UBERON:0000353;5.93e-08;15!UBERON:0004819;5.93e-08;15!UBERON:0001285;5.93e-08;15!UBERON:0007684;5.93e-08;15!UBERON:0000160;7.18e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.21e-21,4;UBERON:0010532,1.91e-15,7;UBERON:0000074,1.91e-15,7;UBERON:0001229,1.91e-15,7;UBERON:0001230,1.91e-15,7;UBERON:0003220,1.91e-15,7;UBERON:0005749,1.91e-15,7;UBERON:0004199,1.91e-15,7;UBERON:0004209,1.91e-15,7;UBERON:0004198,1.91e-15,7;UBERON:0005103,1.07e-13,8;UBERON:0000083,1.07e-13,8;UBERON:0009201,1.07e-13,8;UBERON:0006553,1.07e-13,8;UBERON:0003074,1.07e-13,8;UBERON:0003060,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0004876,2.37e-10,11;UBERON:0001225,1.33e-09,12;UBERON:0008987,1.33e-09,12;UBERON:0003887,1.33e-09,12;UBERON:0001135,5.55e-08,15;UBERON:0001851,5.93e-08,15;UBERON:0004211,5.93e-08,15;UBERON:0009773,5.93e-08,15;UBERON:0000353,5.93e-08,15;UBERON:0001231,5.93e-08,15;UBERON:0001285,5.93e-08,15;UBERON:0007684,5.93e-08,15;UBERON:0004208,5.93e-08,15;UBERON:0006555,1.54e-07,16;UBERON:0004819,1.54e-07,16;UBERON:0000160,7.18e-07,17 | |||
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| ||
|short_description=p3@C8orf4 | |short_description=p3@C8orf4 | ||
}} | }} |
Latest revision as of 05:52, 18 September 2015
Short description: | p3@C8orf4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C8orf4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -172bp_to_NM_020130_5end |
EntrezGene: | C8orf4 |
HGNC: | 1357 |
UniProt: | Q9NR00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 5.15e-21 | 5 |
glomerular cell | 1.91e-15 | 7 |
kidney corpuscule cell | 1.91e-15 | 7 |
kidney cortical cell | 1.33e-09 | 12 |
renal cortical epithelial cell | 1.33e-09 | 12 |
epithelial cell of nephron | 5.93e-08 | 15 |
kidney cell | 3.58e-07 | 17 |
kidney epithelial cell | 3.58e-07 | 17 |