FFCP PHASE1:Hg19::chr2:21231399..21231410,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=Q13789 | |UniProt=Q13789 | ||
|association_with_transcript=105bp_to_X03324_5end | |association_with_transcript=105bp_to_X03324_5end | ||
|cluster_id=chr2:21231399..21231410,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_35_at_APOB_5end | |description=CAGE_peak_35_at_APOB_5end | ||
|id=chr2:21231399..21231410,- | |id=chr2:21231399..21231410,- | ||
|ontology_enrichment_celltype=CL:0000181!4.74e-40!12;CL:0000417!4.74e-40!12;CL:0000668!4.74e-40!12;CL:0000414!4.74e-40!12;CL:0000412!4.74e-40!12;CL:0000182!4.74e-40!12;CL:0000223!9.90e-14!59 | |ontology_enrichment_celltype=CL:0000181!4.74e-40!12;CL:0000417!4.74e-40!12;CL:0000668!4.74e-40!12;CL:0000414!4.74e-40!12;CL:0000412!4.74e-40!12;CL:0000182!4.74e-40!12;CL:0000223!9.90e-14!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.24e-54;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.17e-54,12;CL:0000223,3.57e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.01e-40;11!UBERON:0009497;1.65e-34;13!UBERON:0001041;4.46e-15;30!UBERON:0003104;1.45e-14;31!CL:0000223;2.06e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;3.99e-60;19!UBERON:0006925;3.99e-60;19!UBERON:0002423;1.16e-45;25!UBERON:0002365;2.20e-35;31!UBERON:0002330;2.20e-35;31!UBERON:0002368;3.37e-31;33!UBERON:0000949;8.16e-23;43!UBERON:0005172;1.31e-13;52!UBERON:0005173;1.31e-13;52!UBERON:0002417;6.07e-12;58!UBERON:0000916;6.07e-12;58!UBERON:0002530;7.98e-12;57!UBERON:0001007;4.63e-10;81 | |||
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|short_description=p35@APOB | |short_description=p35@APOB | ||
}} | }} |
Latest revision as of 23:14, 19 September 2015
Short description: | p35@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 105bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.17e-54 | 12 |
endodermal cell | 3.57e-11 | 58 |