FFCP PHASE1:Hg19::chr14:58759862..58759865,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:58759862..58759865,-
|short_description=p@chr14:58759862..58759865,-
|description=CAGE_peak_at_chr14:58759862..58759865,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:58759862..58759865,- | |||
|coexpression_cluster_id=C416 | |||
|description=CAGE_peak_at_chr14:58759862..58759865,- | |||
|id=chr14:58759862..58759865,- | |||
|ontology_enrichment_celltype=CL:0002087!5.73e-12!119;CL:0000738!1.15e-11!140;CL:0000037!1.74e-11!172;CL:0000566!1.74e-11!172;CL:0000988!5.01e-11!182;CL:0002031!8.66e-10!124;CL:0002032!1.33e-09!165;CL:0000837!1.33e-09!165;CL:0002057!6.62e-08!42;CL:0000860!1.23e-07!45;CL:0000766!4.71e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.80e-12;6!CL:0000791;1.66e-07;18!CL:0000789;1.66e-07;18!CL:0002419;1.66e-07;18!CL:0000623;3.39e-07;3!CL:0000084;4.33e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.12e-17,115;CL:0000738,6.59e-17,136;CL:0002031,2.04e-13,120;CL:0000988,7.51e-13,177;CL:0000037,1.07e-12,168;CL:0000624,8.65e-12,6;CL:0002032,5.78e-10,161;CL:0000837,5.78e-10,161;CL:0000838,2.78e-09,52;CL:0000542,5.27e-09,53;CL:0000051,5.27e-09,53;CL:0000473,3.85e-08,48;CL:0000234,3.85e-08,48;CL:0000860,9.53e-08,42;CL:0002057,9.53e-08,42;CL:0000791,1.71e-07,18;CL:0000789,1.71e-07,18;CL:0002420,1.71e-07,18;CL:0002419,1.71e-07,18;CL:0000790,1.71e-07,18;CL:0000766,2.32e-07,72;CL:0000623,3.63e-07,3;CL:0000825,3.63e-07,3;CL:0002194,4.05e-07,59;CL:0000576,4.05e-07,59;CL:0000040,4.05e-07,59;CL:0000559,4.05e-07,59;CL:0000084,6.80e-07,25;CL:0000827,6.80e-07,25;CL:0002009,9.91e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000790;1.66e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.98e-08!102;UBERON:0003061!3.98e-08!102;UBERON:0000178!2.61e-07!15;UBERON:0000179!2.61e-07!15;UBERON:0000463!2.61e-07!15;UBERON:0002193!7.16e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.11e-14;15!UBERON:0000179;2.11e-14;15!UBERON:0000463;2.11e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.63e-14,15;UBERON:0000179,1.63e-14,15;UBERON:0000463,1.63e-14,15;UBERON:0002390,1.37e-11,98;UBERON:0003061,1.37e-11,98;UBERON:0002193,1.08e-09,108 | |||
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| ||
|short_description=p@chr14:58759862..58759865,- | |||
}} | }} |
Latest revision as of 21:25, 24 July 2015
Short description: | p@chr14:58759862..58759865, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:58759862..58759865, - |
Coexpression cluster: | C416_CD4_Neutrophils_CD8_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.12e-17 | 115 |
leukocyte | 6.59e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.04e-13 | 120 |
hematopoietic cell | 7.51e-13 | 177 |
hematopoietic stem cell | 1.07e-12 | 168 |
CD4-positive, alpha-beta T cell | 8.65e-12 | 6 |
hematopoietic oligopotent progenitor cell | 5.78e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.78e-10 | 161 |
lymphoid lineage restricted progenitor cell | 2.78e-09 | 52 |
lymphocyte | 5.27e-09 | 53 |
common lymphoid progenitor | 5.27e-09 | 53 |
defensive cell | 3.85e-08 | 48 |
phagocyte | 3.85e-08 | 48 |
classical monocyte | 9.53e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.53e-08 | 42 |
mature alpha-beta T cell | 1.71e-07 | 18 |
alpha-beta T cell | 1.71e-07 | 18 |
immature T cell | 1.71e-07 | 18 |
mature T cell | 1.71e-07 | 18 |
immature alpha-beta T cell | 1.71e-07 | 18 |
myeloid leukocyte | 2.32e-07 | 72 |
natural killer cell | 3.63e-07 | 3 |
pro-NK cell | 3.63e-07 | 3 |
monopoietic cell | 4.05e-07 | 59 |
monocyte | 4.05e-07 | 59 |
monoblast | 4.05e-07 | 59 |
promonocyte | 4.05e-07 | 59 |
T cell | 6.80e-07 | 25 |
pro-T cell | 6.80e-07 | 25 |
macrophage dendritic cell progenitor | 9.91e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
blood | 1.63e-14 | 15 |
haemolymphatic fluid | 1.63e-14 | 15 |
organism substance | 1.63e-14 | 15 |
hematopoietic system | 1.37e-11 | 98 |
blood island | 1.37e-11 | 98 |
hemolymphoid system | 1.08e-09 | 108 |