FFCP PHASE1:Hg19::chr2:89161517..89161528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-82bp_to_ENST00000418209_5end | |association_with_transcript=-82bp_to_ENST00000418209_5end | ||
|cluster_id=chr2:89161517..89161528,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_2_at_ENST00000418209_5end | |description=CAGE_peak_2_at_ENST00000418209_5end | ||
|id=chr2:89161517..89161528,- | |id=chr2:89161517..89161528,- | ||
|ontology_enrichment_celltype=CL:0000236!1.72e-48!14;CL:0000945!4.58e-32!24;CL:0000826!4.58e-32!24;CL:0000838!3.53e-23!52;CL:0000542!1.15e-22!53;CL:0000051!1.15e-22!53;CL:0000784!4.19e-16!3;CL:0000738!2.62e-14!140;CL:0000988!6.87e-12!182;CL:0000037!9.34e-12!172;CL:0000566!9.34e-12!172;CL:0002087!1.50e-11!119;CL:0002031!1.16e-09!124;CL:0002032!5.15e-08!165;CL:0000837!5.15e-08!165 | |ontology_enrichment_celltype=CL:0000236!1.72e-48!14;CL:0000945!4.58e-32!24;CL:0000826!4.58e-32!24;CL:0000838!3.53e-23!52;CL:0000542!1.15e-22!53;CL:0000051!1.15e-22!53;CL:0000784!4.19e-16!3;CL:0000738!2.62e-14!140;CL:0000988!6.87e-12!182;CL:0000037!9.34e-12!172;CL:0000566!9.34e-12!172;CL:0002087!1.50e-11!119;CL:0002031!1.16e-09!124;CL:0002032!5.15e-08!165;CL:0000837!5.15e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.65e-100;13!CL:0000945;3.35e-64;24!CL:0000784;7.03e-35;3!CL:0000542;3.22e-30;53!CL:0000785;1.11e-12;1!CL:0000819;1.11e-12;1!CL:0000451;5.81e-10;10!CL:0000738;3.15e-07;136!CL:0002087;5.95e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.31e-93,14;CL:0000945,2.75e-64,24;CL:0000826,2.75e-64,24;CL:0000838,2.07e-39,52;CL:0000542,1.24e-38,53;CL:0000051,1.24e-38,53;CL:0000784,7.04e-35,3;CL:0000738,3.31e-21,136;CL:0002087,2.38e-19,115;CL:0002031,1.82e-18,120;CL:0000037,8.77e-17,168;CL:0000988,7.99e-16,177;CL:0002032,2.86e-13,161;CL:0000837,2.86e-13,161;CL:0000819,1.11e-12,1;CL:0000451,5.81e-10,10;CL:0000785,5.73e-07,2;CL:0000955,5.73e-07,2;CL:0000818,5.73e-07,2;CL:0000954,5.73e-07,2;CL:0000816,5.73e-07,2;CL:0000134,9.21e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;3.22e-30;53!CL:0000954;5.73e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!5.52e-08!10 | |ontology_enrichment_disease=DOID:0060058!5.52e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.11e-12;1!DOID:8675;1.11e-12;1!DOID:0060058;1.46e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.11e-12,1;DOID:8675,1.11e-12,1;DOID:0060058,1.51e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.75e-07!15;UBERON:0000179!1.75e-07!15;UBERON:0000463!1.75e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@ENST00000418209 | |short_description=p2@ENST00000418209 | ||
}} | }} |
Latest revision as of 13:05, 29 July 2015
Short description: | p2@ENST00000418209 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000418209_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -82bp_to_ENST00000418209_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.31e-93 | 14 |
lymphocyte of B lineage | 2.75e-64 | 24 |
pro-B cell | 2.75e-64 | 24 |
lymphoid lineage restricted progenitor cell | 2.07e-39 | 52 |
lymphocyte | 1.24e-38 | 53 |
common lymphoid progenitor | 1.24e-38 | 53 |
plasmacytoid dendritic cell | 7.04e-35 | 3 |
leukocyte | 3.31e-21 | 136 |
nongranular leukocyte | 2.38e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.82e-18 | 120 |
hematopoietic stem cell | 8.77e-17 | 168 |
hematopoietic cell | 7.99e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.86e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-13 | 161 |
B-1 B cell | 1.11e-12 | 1 |
dendritic cell | 5.81e-10 | 10 |
mature B cell | 5.73e-07 | 2 |
pre-B-II cell | 5.73e-07 | 2 |
transitional stage B cell | 5.73e-07 | 2 |
small pre-B-II cell | 5.73e-07 | 2 |
immature B cell | 5.73e-07 | 2 |
mesenchymal cell | 9.21e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.11e-12 | 1 |
lymphosarcoma | 1.11e-12 | 1 |
lymphoma | 1.51e-10 | 10 |