FFCP PHASE1:Hg19::chrX:123095860..123095888,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10735 | |EntrezGene=10735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |HGNC=11355 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMT2 | |UniProt=B1AMT2 | ||
|association_with_transcript=0bp_to_ENST00000428941_5end | |association_with_transcript=0bp_to_ENST00000428941_5end | ||
|cluster_id=chrX:123095860..123095888,+ | |||
|description=CAGE_peak_10_at_STAG2_5end | |description=CAGE_peak_10_at_STAG2_5end | ||
|id=chrX:123095860..123095888,+ | |id=chrX:123095860..123095888,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.24e-08!24;CL:0000826!3.24e-08!24;CL:0000542!5.97e-08!53;CL:0000051!5.97e-08!53;CL:0000838!1.19e-07!52 | |ontology_enrichment_celltype=CL:0000945!3.24e-08!24;CL:0000826!3.24e-08!24;CL:0000542!5.97e-08!53;CL:0000051!5.97e-08!53;CL:0000838!1.19e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.13e-09;24!CL:0002322;6.53e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.83e-10,24;CL:0000826,1.83e-10,24;CL:0002322,7.43e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.26e-22!235;DOID:14566!2.95e-22!239;DOID:2531!1.35e-11!51;DOID:0060083!1.35e-11!51;DOID:0050687!3.75e-11!143;DOID:0050686!4.34e-11!137;DOID:305!2.47e-09!106;DOID:1240!6.65e-09!39;DOID:8692!6.99e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.42e-08;51!DOID:0060083;3.42e-08;51!DOID:1240;2.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.27e-14,235;DOID:14566,4.42e-13,239;DOID:2531,8.11e-12,51;DOID:0060083,8.11e-12,51;DOID:1240,5.94e-09,39;DOID:0050686,6.81e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.86e-13!94;UBERON:0001016!9.86e-13!94;UBERON:0001017!2.90e-11!82;UBERON:0005743!3.35e-11!86;UBERON:0001049!2.97e-09!57;UBERON:0005068!2.97e-09!57;UBERON:0006241!2.97e-09!57;UBERON:0007135!2.97e-09!57;UBERON:0000955!9.91e-09!69;UBERON:0006238!9.91e-09!69;UBERON:0002020!3.98e-08!34;UBERON:0003528!3.98e-08!34;UBERON:0002346!8.60e-08!90;UBERON:0002791!1.03e-07!33;UBERON:0001893!1.22e-07!34;UBERON:0002780!1.38e-07!41;UBERON:0001890!1.38e-07!41;UBERON:0006240!1.38e-07!41;UBERON:0003075!2.28e-07!86;UBERON:0007284!2.28e-07!86;UBERON:0002616!4.49e-07!59;UBERON:0003080!4.85e-07!42;UBERON:0001869!5.68e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.48e-08;34!UBERON:0002020;1.48e-08;34!UBERON:0002791;2.24e-08;32!UBERON:0001869;1.84e-07;32!UBERON:0001893;2.08e-07;34!UBERON:0000125;3.59e-07;9!UBERON:0002308;3.59e-07;9!UBERON:0002780;3.68e-07;41!UBERON:0001890;3.68e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-11,89;UBERON:0001017,7.46e-11,81;UBERON:0001049,9.57e-10,56;UBERON:0005068,9.57e-10,56;UBERON:0006241,9.57e-10,56;UBERON:0007135,9.57e-10,56;UBERON:0003528,1.57e-09,34;UBERON:0002020,1.57e-09,34;UBERON:0000073,8.52e-09,53;UBERON:0002616,8.52e-09,53;UBERON:0000955,9.56e-09,68;UBERON:0006238,9.56e-09,68;UBERON:0002780,1.33e-08,41;UBERON:0001890,1.33e-08,41;UBERON:0003080,1.33e-08,41;UBERON:0006240,1.33e-08,41;UBERON:0001893,1.82e-08,34;UBERON:0002791,2.31e-08,32;UBERON:0001869,1.77e-07,32;UBERON:0000125,4.23e-07,9;UBERON:0002308,4.23e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0,0.37129905888014,0,0,0,0,0,0.61560529038394,0,0.313454721478088,3.43483184557268,0.958120975510189,1.00434111675842,1.98674854944673,1.72411237844886,1.96776953284198,0,0.383829398097213,0.309632246632152,0,0,0,2.01414721508784,1.13735385989937,2.34880351467878,0,0,0.217010870715852,0.447830948479849,0,0.77272670290256,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0,0.290209238628584,0,0,0,0,0.434377689410233,0,0.736555271975129,0,0.845021145247767,0,0.419317291016752,0.112328631146495,0,0.32145117339416,0,0.59675003159727,0.547992461293902,1.75996244461323,1.63841583378639,0.889509253863555,2.13365111283254,2.40237592221607,1.72425731986345,1.98313461835459,0.954053754535364,0,1.17447437874188,1.14681968437569,0,0,2.10707267820062,0.590129310341499,0.393010762749165,0.411202997999018,0.167186495390678,0.651844533267181,0.946895611469467,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.128091319725675,0.260118695119756,0.328875809207352,0,0,0.593146252648242,1.33770414044857,0,0.566546713487831,0,0,0.253019692019503,0.95569624297229,0.651083453856419,0,0.451725357233318,1.02389288923535,1.24930726552346,0.947109008176067,0,1.00803371612366,0.802320587350522,0.434473211648397,0,0,0,0,0.50133791063589,0,0,0,1.22895262313288,0.443458794925128,0.790513071238134,0.0654895377488563,0,0,0,0,0.132957960518865,1.90792499444274,1.14398982156026,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0.805658634218294,0.760272105718513,0.24406205754817,1.10298924103761,0,1.07159673940896,1.12264686313085,0.563057402416611,1.53316637465883,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.404132016209064,0.490385709340376,0,0,0,0,0,0.149448680551801,0.822041490506354,1.29498355494505,1.40450806702248,0.204154171254893,0.737005903870608,0.103325781175765,0,0,0,0,0.168336113954066,1.50142223846357,0.277064115484183,1.31693286264251,0,0,0.453728732640084,1.61450672119976,0.427114777637135,0.211931901159562,0.600182192168805,0.515262646192195,0.515281080091258,0,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.201504196455281,0.508681776931463,0.193260853163297,0.818238361772504,0.286804595389004,5.61079048196139,4.63854189125198,5.57730925773688,3.31715376049185,3.02785021050754,7.66452454059243,0,0,0,0.464367928031979,0,0.946454400318751,0.337169380156203,1.92808823906786,0.882351781859152,1.08939722046203,0.949082476444386,0.404493924480493,0.784885860501384,1.15424147083917,0,0,0.4115740113314,0,0,0,0,4.41463099414651,0.491953754172454,0,0.109750285408626,0,0.402115889646523,0.277765335475589,0,0,1.44331342025273,1.27523445472584,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0.297262324577456,0,0,0.141775097242386,1.07470227243418,0.290633938513962,0,2.46331618947972,0.44024217006613,0.207328115540772,1.00883967391873,0.75745460055828,1.46045156871989,0,0,0,0.308482478109971,0,0.285826432630578,0.448524337381443,0,1.24675085895615,0,0,0.845302752556,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0.710783897485092,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.537182889719687,1.68127715990291,1.37921532141349,0.215627574859517,0.385029108839245,1.52456774533478,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0.828831026872071,0.736148950314839,0.500170521059677,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0.601892199455438,0,0,0,0.184369168541703,0.434418072340414,0,0,0.82707210449155,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.492762936082855,0,0.232420756919918,0.725156697549733,0.200506470303285,0,0.229628896329213,0,0,0,0.770153371044148,0,0,0.633309773357254,0,0.340187410553031,0.863663664408557,0,0,0,0,0,0,5.26223703950243,6.27445082459761,0.769350375349168,0.328014645699706,0.650756789328606,0.515205058238611,1.37354197227515,1.89771849817352,0,0,0,0.290012154876366,0.616194468458578,0.767518373630648,0.964856007391714,1.28904293841928,0.435050081742686,1.02271952899321,0,0,0.192190067365106,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.949138274156178,0,0,0.855877976067841,0,1.56989728039846,0,0.274537029736055,0.706874414074119,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.573645408816206,0,0,0.354761064070598,0.211107635297664,0,0,0.699869440489966,0.48111056362756,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0.569647187174163,0.714695326373367,0,0.648473311192717,0,0,0.534120355637366,0,1.47024129588619,1.48642540100575,3.89526875036401,3.77051769746595,3.50737800003409,0.997896857164083,1.91505370132367,0.846694330895531,0.973865820823666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| ||
|short_description=p10@STAG2 | |short_description=p10@STAG2 | ||
}} | }} |
Latest revision as of 07:52, 19 September 2015
Short description: | p10@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428941_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | B1AMT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.83e-10 | 24 |
pro-B cell | 1.83e-10 | 24 |
embryonic stem cell | 7.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.32e-11 | 89 |
central nervous system | 7.46e-11 | 81 |
neural tube | 9.57e-10 | 56 |
neural rod | 9.57e-10 | 56 |
future spinal cord | 9.57e-10 | 56 |
neural keel | 9.57e-10 | 56 |
brain grey matter | 1.57e-09 | 34 |
gray matter | 1.57e-09 | 34 |
regional part of nervous system | 8.52e-09 | 53 |
regional part of brain | 8.52e-09 | 53 |
brain | 9.56e-09 | 68 |
future brain | 9.56e-09 | 68 |
regional part of forebrain | 1.33e-08 | 41 |
forebrain | 1.33e-08 | 41 |
anterior neural tube | 1.33e-08 | 41 |
future forebrain | 1.33e-08 | 41 |
telencephalon | 1.82e-08 | 34 |
regional part of telencephalon | 2.31e-08 | 32 |
cerebral hemisphere | 1.77e-07 | 32 |
neural nucleus | 4.23e-07 | 9 |
nucleus of brain | 4.23e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.27e-14 | 235 |
disease of cellular proliferation | 4.42e-13 | 239 |
hematologic cancer | 8.11e-12 | 51 |
immune system cancer | 8.11e-12 | 51 |
leukemia | 5.94e-09 | 39 |
organ system cancer | 6.81e-08 | 137 |