FFCP PHASE1:Hg19::chr14:85799279..85799283,+: Difference between revisions
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|id=chr14:85799279..85799283,+
|short_description=p@chr14:85799279..85799283,+
|description=CAGE_peak_at_chr14:85799279..85799283,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:85799279..85799283,+ | |||
|coexpression_cluster_id=C3242 | |||
|description=CAGE_peak_at_chr14:85799279..85799283,+ | |||
|id=chr14:85799279..85799283,+ | |||
|ontology_enrichment_celltype=CL:0002368!7.20e-31!13;CL:0002202!1.08e-25!9;CL:0002632!1.08e-25!9;CL:0002159!5.45e-23!13;CL:0000068!2.59e-20!3;CL:0000069!2.59e-20!3;CL:0000307!2.59e-20!3;CL:0000377!2.59e-20!3;CL:0002328!2.95e-20!3;CL:0002076!3.44e-19!43;CL:0000317!7.61e-14!2;CL:1000448!7.61e-14!2;CL:0002308!7.61e-14!2;CL:0002140!7.61e-14!2;CL:0000223!2.33e-13!59;CL:0000575!2.39e-13!2;CL:0000362!4.58e-13!8;CL:0000066!7.38e-12!254;CL:0000076!2.36e-10!62;CL:0000240!3.07e-10!6;CL:0000311!3.07e-10!6;CL:0000079!3.07e-10!6;CL:0000237!3.07e-10!6;CL:0000036!3.07e-10!6;CL:0000357!3.07e-10!6;CL:0000114!3.07e-10!6;CL:0002077!1.52e-08!33;CL:0002336!8.28e-08!1;CL:0002261!8.28e-08!1;CL:0002170!8.28e-08!1;CL:0002327!3.71e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.51e-35;13!CL:0002202;1.21e-32;9!CL:0002632;1.21e-32;9!CL:0000307;2.81e-25;3!CL:0002328;3.38e-25;3!CL:0002336;3.91e-19;1!CL:0002261;3.91e-19;1!CL:0002170;3.91e-19;1!CL:0000240;5.76e-13;6!CL:0000311;5.76e-13;6!CL:0000079;5.76e-13;6!CL:0000237;5.76e-13;6!CL:0002076;4.25e-12;42!CL:0000317;2.99e-10;2!CL:1000448;2.99e-10;2!CL:0002308;2.99e-10;2!CL:0002140;2.99e-10;2!CL:0000362;5.87e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.84e-35,13;CL:0002202,1.37e-32,9;CL:0002632,1.37e-32,9;CL:0000068,3.38e-25,3;CL:0000069,3.38e-25,3;CL:0002328,3.38e-25,3;CL:0000307,3.38e-25,3;CL:0000377,3.38e-25,3;CL:0002336,5.62e-19,1;CL:0002261,5.62e-19,1;CL:0002170,5.62e-19,1;CL:0002076,1.98e-15,42;CL:0000240,6.12e-13,6;CL:0000311,6.12e-13,6;CL:0000079,6.12e-13,6;CL:0000237,6.12e-13,6;CL:0000036,6.12e-13,6;CL:0000357,6.12e-13,6;CL:0000114,6.12e-13,6;CL:0000223,3.84e-11,58;CL:0000317,3.27e-10,2;CL:1000448,3.27e-10,2;CL:0002308,3.27e-10,2;CL:0002140,3.27e-10,2;CL:0000362,5.87e-09,9;CL:0000066,6.20e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000377;2.81e-25;3!CL:0000357;5.76e-13;6!CL:0000114;5.76e-13;6 | |||
|ontology_enrichment_disease=DOID:0060085!1.22e-07!1;DOID:3165!1.22e-07!1;DOID:0060121!1.22e-07!1;DOID:2438!1.22e-07!1;DOID:4418!1.22e-07!1;DOID:1749!1.86e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!2.95e-20!3;UBERON:0002031!2.95e-20!3;UBERON:0007196!2.48e-16!14;UBERON:0001558!2.48e-16!14;UBERON:0002185!2.47e-15!4;UBERON:0002419!7.61e-14!2;UBERON:0007771!7.61e-14!2;UBERON:0003297!7.61e-14!2;UBERON:0001821!7.61e-14!2;UBERON:0003487!7.61e-14!2;UBERON:0001820!7.61e-14!2;UBERON:0005089!7.61e-14!2;UBERON:0005088!7.61e-14!2;UBERON:0003729!3.58e-12!5;UBERON:0003126!5.42e-09!7;UBERON:0001005!5.42e-09!7;UBERON:0003102!1.29e-08!95;UBERON:0005157!1.78e-08!51;UBERON:0001003!1.65e-07!14;UBERON:0007376!1.65e-07!14;UBERON:0007383!1.65e-07!14;UBERON:0005153!1.79e-07!37;UBERON:0003343!2.40e-07!4;UBERON:0004785!2.40e-07!4;UBERON:0005085!2.87e-07!29;UBERON:0001004!3.07e-07!72;UBERON:0001911!3.71e-07!4;UBERON:0005333!3.71e-07!4;UBERON:0008425!3.71e-07!4;UBERON:0005311!3.71e-07!4;UBERON:0000964!4.20e-07!4;UBERON:0004348!4.20e-07!4;UBERON:0005427!4.20e-07!4;UBERON:0000485!4.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.38e-25;3!UBERON:0002031;3.38e-25;3!UBERON:0007196;8.76e-20;15!UBERON:0001558;8.76e-20;15!UBERON:0002185;1.51e-15;5!UBERON:0003126;2.02e-11;7!UBERON:0001005;2.02e-11;7!UBERON:0000485;2.18e-11;7!UBERON:0002419;2.99e-10;2!UBERON:0007771;2.99e-10;2!UBERON:0003297;2.99e-10;2!UBERON:0001821;2.99e-10;2!UBERON:0003487;2.99e-10;2!UBERON:0001820;2.99e-10;2!UBERON:0005178;1.36e-08;34!UBERON:0002224;1.36e-08;34!UBERON:0005181;1.79e-08;35!UBERON:0000065;2.47e-08;44!UBERON:0000072;3.81e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.38e-25,3;UBERON:0002031,3.38e-25,3;UBERON:0007196,9.42e-20,15;UBERON:0001558,9.42e-20,15;UBERON:0002185,1.51e-15,5;UBERON:0003126,2.18e-11,7;UBERON:0001005,2.18e-11,7;UBERON:0002419,3.27e-10,2;UBERON:0007771,3.27e-10,2;UBERON:0003297,3.27e-10,2;UBERON:0001821,3.27e-10,2;UBERON:0003487,3.27e-10,2;UBERON:0001820,3.27e-10,2;UBERON:0005089,3.27e-10,2;UBERON:0005088,3.27e-10,2;UBERON:0000485,4.61e-09,9;UBERON:0005178,6.52e-09,34;UBERON:0002224,6.52e-09,34;UBERON:0005181,1.15e-08,35;UBERON:0000065,1.56e-08,54;UBERON:0008947,5.29e-08,38;UBERON:0003258,5.29e-08,38 | |||
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|short_description=p@chr14:85799279..85799283,+ | |||
}} | }} |
Latest revision as of 23:17, 24 July 2015
Short description: | p@chr14:85799279..85799283, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:85799279..85799283, + |
Coexpression cluster: | C3242_Small_Tracheal_Bronchial_Mallassezderived_Keratinocyte_Gingival_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.84e-35 | 13 |
epithelial cell of tracheobronchial tree | 1.37e-32 | 9 |
epithelial cell of lower respiratory tract | 1.37e-32 | 9 |
duct epithelial cell | 3.38e-25 | 3 |
branched duct epithelial cell | 3.38e-25 | 3 |
bronchial epithelial cell | 3.38e-25 | 3 |
tracheal epithelial cell | 3.38e-25 | 3 |
tracheoblast | 3.38e-25 | 3 |
buccal mucosa cell | 5.62e-19 | 1 |
endothelial cell of viscerocranial mucosa | 5.62e-19 | 1 |
keratinized cell of the oral mucosa | 5.62e-19 | 1 |
endo-epithelial cell | 1.98e-15 | 42 |
stratified squamous epithelial cell | 6.12e-13 | 6 |
keratin accumulating cell | 6.12e-13 | 6 |
stratified epithelial cell | 6.12e-13 | 6 |
keratinizing barrier epithelial cell | 6.12e-13 | 6 |
epithelial fate stem cell | 6.12e-13 | 6 |
stratified epithelial stem cell | 6.12e-13 | 6 |
surface ectodermal cell | 6.12e-13 | 6 |
endodermal cell | 3.84e-11 | 58 |
sebum secreting cell | 3.27e-10 | 2 |
epithelial cell of sweat gland | 3.27e-10 | 2 |
epithelial cell of skin gland | 3.27e-10 | 2 |
acinar cell of sebaceous gland | 3.27e-10 | 2 |
epidermal cell | 5.87e-09 | 9 |
epithelial cell | 6.20e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.38e-25 | 3 |
epithelium of bronchus | 3.38e-25 | 3 |
tracheobronchial tree | 9.42e-20 | 15 |
lower respiratory tract | 9.42e-20 | 15 |
bronchus | 1.51e-15 | 5 |
trachea | 2.18e-11 | 7 |
respiratory airway | 2.18e-11 | 7 |
skin gland | 3.27e-10 | 2 |
epidermis gland | 3.27e-10 | 2 |
gland of integumental system | 3.27e-10 | 2 |
sebaceous gland | 3.27e-10 | 2 |
skin sebaceous gland | 3.27e-10 | 2 |
sweat gland | 3.27e-10 | 2 |
sweat gland placode | 3.27e-10 | 2 |
sebaceous gland placode | 3.27e-10 | 2 |
simple columnar epithelium | 4.61e-09 | 9 |
thoracic cavity element | 6.52e-09 | 34 |
thoracic cavity | 6.52e-09 | 34 |
thoracic segment organ | 1.15e-08 | 35 |
respiratory tract | 1.56e-08 | 54 |
respiratory primordium | 5.29e-08 | 38 |
endoderm of foregut | 5.29e-08 | 38 |