FFCP PHASE1:Hg19::chr3:189349132..189349142,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8626 | |EntrezGene=8626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15979 | |HGNC=15979 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_ENST00000486398_5end | |association_with_transcript=-62bp_to_ENST00000486398_5end | ||
|cluster_id=chr3:189349132..189349142,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_7_at_TP63_5end | |description=CAGE_peak_7_at_TP63_5end | ||
|id=chr3:189349132..189349142,+ | |id=chr3:189349132..189349142,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.89e-12!24;CL:0000826!2.89e-12!24;CL:0000080!1.45e-09!6;CL:0000542!6.26e-08!53;CL:0000051!6.26e-08!53;CL:0000838!7.40e-07!52 | |ontology_enrichment_celltype=CL:0000945!2.89e-12!24;CL:0000826!2.89e-12!24;CL:0000080!1.45e-09!6;CL:0000542!6.26e-08!53;CL:0000051!6.26e-08!53;CL:0000838!7.40e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.37e-16;24!CL:0000785;3.08e-12;1!CL:0000222;3.08e-12;1!CL:0000819;3.08e-12;1!CL:0000054;9.53e-07;2!CL:0000137;9.53e-07;2!CL:0000092;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.87e-16,24;CL:0000826,2.87e-16,24;CL:0000819,3.45e-12,1;CL:0000838,7.60e-10,52;CL:0000542,1.20e-09,53;CL:0000051,1.20e-09,53;CL:0000988,2.67e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;9.53e-07;2!UBERON:0008814;9.53e-07;2!UBERON:0010056;9.53e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.65e-15!10;DOID:1287!1.05e-07!4;DOID:114!1.51e-07!2 | |ontology_enrichment_disease=DOID:0060058!1.65e-15!10;DOID:1287!1.05e-07!4;DOID:114!1.51e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:0060060;9.92e-13;1!DOID:0060061;9.92e-13;1!DOID:8691;9.92e-13;1!DOID:630;1.40e-12;1!DOID:0050177;1.40e-12;1!DOID:0050427;1.40e-12;1!DOID:0060073;3.08e-12;1!DOID:8675;3.08e-12;1!DOID:5662;3.08e-12;1!DOID:3910;6.42e-07;2!DOID:200;9.53e-07;2!DOID:4305;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.92e-13,1;DOID:0060061,9.92e-13,1;DOID:8691,9.92e-13,1;DOID:630,1.25e-12,1;DOID:0050177,1.25e-12,1;DOID:0050427,1.25e-12,1;DOID:5662,3.08e-12,1;DOID:0060073,3.45e-12,1;DOID:8675,3.45e-12,1;DOID:3910,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!1.41e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.40e-12;1!UBERON:0000026;1.40e-12;1!UBERON:0008784;1.40e-12;1!UBERON:0006058;1.40e-12;1!UBERON:0003663;1.40e-12;1!UBERON:0004256;1.40e-12;1!UBERON:0004708;1.40e-12;1!UBERON:0002101;1.40e-12;1!UBERON:0004709;1.40e-12;1!UBERON:0002529;1.40e-12;1!UBERON:0010538;1.40e-12;1!UBERON:0003661;1.40e-12;1!UBERON:0010890;1.40e-12;1!UBERON:0002471;1.40e-12;1!UBERON:0001383;1.40e-12;1!UBERON:0010758;1.40e-12;1!UBERON:0010707;1.40e-12;1!UBERON:0000978;1.40e-12;1!UBERON:0002103;1.40e-12;1!UBERON:0001665;1.40e-12;1!UBERON:0003823;1.40e-12;1!UBERON:0000154;1.40e-12;1!UBERON:0010709;1.40e-12;1!UBERON:0002331;6.62e-11;10!UBERON:0000178;1.95e-07;15!UBERON:0000179;1.95e-07;15!UBERON:0000463;1.95e-07;15!UBERON:0004903;6.42e-07;2!UBERON:0005090;6.42e-07;2!UBERON:0001630;6.42e-07;2!UBERON:0002173;6.42e-07;2!UBERON:0002186;6.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.11e-12,1;UBERON:0001389,1.11e-12,1;UBERON:0000026,1.11e-12,1;UBERON:0008784,1.11e-12,1;UBERON:0006058,1.11e-12,1;UBERON:0003663,1.11e-12,1;UBERON:0004256,1.11e-12,1;UBERON:0004708,1.11e-12,1;UBERON:0002101,1.11e-12,1;UBERON:0004709,1.11e-12,1;UBERON:0002529,1.11e-12,1;UBERON:0010538,1.11e-12,1;UBERON:0003661,1.11e-12,1;UBERON:0010890,1.11e-12,1;UBERON:0002471,1.11e-12,1;UBERON:0001383,1.11e-12,1;UBERON:0004357,1.11e-12,1;UBERON:0004347,1.11e-12,1;UBERON:0005420,1.11e-12,1;UBERON:0005732,1.11e-12,1;UBERON:0010758,1.11e-12,1;UBERON:0010707,1.11e-12,1;UBERON:0000978,1.11e-12,1;UBERON:0002103,1.11e-12,1;UBERON:0001665,1.11e-12,1;UBERON:0003823,1.11e-12,1;UBERON:0000154,1.11e-12,1;UBERON:0010709,1.11e-12,1;UBERON:0005733,1.11e-12,1;UBERON:0005730,1.11e-12,1;UBERON:0002331,6.62e-11,10;UBERON:0000358,6.62e-11,10;UBERON:0000307,6.62e-11,10;UBERON:0000091,6.62e-11,10;UBERON:0000087,6.62e-11,10;UBERON:0007010,6.62e-11,10;UBERON:0007806,6.62e-11,10;UBERON:0008780,6.62e-11,10;UBERON:0005728,6.62e-11,10;UBERON:0000178,1.95e-07,15;UBERON:0000179,1.95e-07,15;UBERON:0000463,1.95e-07,15;UBERON:0005090,5.73e-07,2;UBERON:0001630,5.73e-07,2;UBERON:0004903,7.20e-07,2;UBERON:0002173,7.20e-07,2;UBERON:0002186,7.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,1.88831355734875,2.20390187678302,0,0,0,0,0,0.369754010166788,0.154934401160603,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70338495076131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96935688737711,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,2.03402920234213,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4538874045861,8.89660360414821,8.45817790994189,0.067401132980677,0,0,1.45963831372533,0,0.971121518136371,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0.37494122388632,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19979833367888,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0.327543835020193,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54339208493677,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,1.84793052341245,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0,0,1.30630048738177,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,2.24397944612263 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,1.88831355734875,2.20390187678302,0,0,0,0,0,0.369754010166788,0.154934401160603,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70338495076131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96935688737711,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,2.03402920234213,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4538874045861,8.89660360414821,8.45817790994189,0.067401132980677,0,0,1.45963831372533,0,0.971121518136371,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0.37494122388632,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19979833367888,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0.327543835020193,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54339208493677,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,1.84793052341245,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0,0,1.30630048738177,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,2.24397944612263 | ||
|short_description=p7@TP63 | |short_description=p7@TP63 | ||
}} | }} |
Latest revision as of 09:07, 17 September 2015
Short description: | p7@TP63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TP63_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -62bp_to_ENST00000486398_5end |
EntrezGene: | TP63 |
HGNC: | 15979 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.87e-16 | 24 |
pro-B cell | 2.87e-16 | 24 |
B-1 B cell | 3.45e-12 | 1 |
lymphoid lineage restricted progenitor cell | 7.60e-10 | 52 |
lymphocyte | 1.20e-09 | 53 |
common lymphoid progenitor | 1.20e-09 | 53 |
hematopoietic cell | 2.67e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.92e-13 | 1 |
cutaneous T cell lymphoma | 9.92e-13 | 1 |
mycosis fungoides | 9.92e-13 | 1 |
genetic disease | 1.25e-12 | 1 |
monogenic disease | 1.25e-12 | 1 |
xeroderma pigmentosum | 1.25e-12 | 1 |
pleomorphic carcinoma | 3.08e-12 | 1 |
lymphatic system cancer | 3.45e-12 | 1 |
lymphosarcoma | 3.45e-12 | 1 |
lung adenocarcinoma | 7.20e-07 | 2 |