FFCP PHASE1:Hg19::chr3:58200310..58200326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1776 | |EntrezGene=1776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2959 | |HGNC=2959 | ||
|TSSclassifier=strong | |||
|UniProt=Q13609,C9J0L2 | |UniProt=Q13609,C9J0L2 | ||
|association_with_transcript=71bp_to_ENST00000318316,ENST00000460422,NM_004944,uc003djp.1_5end | |association_with_transcript=71bp_to_ENST00000318316,ENST00000460422,NM_004944,uc003djp.1_5end | ||
|cluster_id=chr3:58200310..58200326,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_5_at_DNASE1L3_5end | |description=CAGE_peak_5_at_DNASE1L3_5end | ||
|id=chr3:58200310..58200326,- | |id=chr3:58200310..58200326,- | ||
|ontology_enrichment_celltype=CL:0000738!2.63e-22!140;CL:0000860!7.49e-18!45;CL:0002009!2.19e-17!65;CL:0002087!1.81e-16!119;CL:0002057!2.55e-16!42;CL:0000037!3.27e-16!172;CL:0000566!3.27e-16!172;CL:0000451!1.16e-15!10;CL:0000557!3.56e-15!71;CL:0002194!3.57e-15!63;CL:0000576!3.57e-15!63;CL:0000040!3.57e-15!63;CL:0000559!3.57e-15!63;CL:0000766!1.50e-14!76;CL:0000988!1.69e-14!182;CL:0002031!1.24e-13!124;CL:0000839!7.33e-13!70;CL:0002032!2.75e-12!165;CL:0000837!2.75e-12!165;CL:0000990!4.95e-12!8;CL:0000763!4.73e-11!112;CL:0000049!4.73e-11!112;CL:0000453!4.29e-09!5;CL:0000840!3.31e-08!5;CL:0001029!3.31e-08!5;CL:0000784!2.58e-07!3 | |ontology_enrichment_celltype=CL:0000738!2.63e-22!140;CL:0000860!7.49e-18!45;CL:0002009!2.19e-17!65;CL:0002087!1.81e-16!119;CL:0002057!2.55e-16!42;CL:0000037!3.27e-16!172;CL:0000566!3.27e-16!172;CL:0000451!1.16e-15!10;CL:0000557!3.56e-15!71;CL:0002194!3.57e-15!63;CL:0000576!3.57e-15!63;CL:0000040!3.57e-15!63;CL:0000559!3.57e-15!63;CL:0000766!1.50e-14!76;CL:0000988!1.69e-14!182;CL:0002031!1.24e-13!124;CL:0000839!7.33e-13!70;CL:0002032!2.75e-12!165;CL:0000837!2.75e-12!165;CL:0000990!4.95e-12!8;CL:0000763!4.73e-11!112;CL:0000049!4.73e-11!112;CL:0000453!4.29e-09!5;CL:0000840!3.31e-08!5;CL:0001029!3.31e-08!5;CL:0000784!2.58e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;5.61e-22;3!CL:0000451;7.59e-16;10!CL:0001014;7.39e-15;2!CL:0001016;7.39e-15;2!CL:0000840;4.77e-11;5!CL:0002393;2.42e-10;6!CL:0002397;2.42e-10;6!CL:0000945;9.78e-10;24!CL:0002623;1.22e-09;3!CL:0000946;2.04e-08;1!CL:0000786;2.04e-08;1!CL:0000990;1.63e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.62e-22,3;CL:0000451,7.61e-16,10;CL:0001014,7.40e-15,2;CL:0001016,7.40e-15,2;CL:0000738,6.05e-14,136;CL:0000840,4.77e-11,5;CL:0001029,4.77e-11,5;CL:0002031,5.90e-11,120;CL:0000037,1.37e-10,168;CL:0002087,5.89e-10,115;CL:0000988,7.28e-10,177;CL:0000945,9.63e-10,24;CL:0000826,9.63e-10,24;CL:0002623,1.40e-09,3;CL:0002009,5.58e-09,61;CL:0002032,1.53e-08,161;CL:0000837,1.53e-08,161;CL:0000946,2.04e-08,1;CL:0000786,2.04e-08,1;CL:0000980,2.04e-08,1;CL:0000557,4.84e-08,67;CL:0000990,1.63e-07,8;CL:0002393,5.14e-07,9;CL:0002397,5.14e-07,9;CL:0000860,9.15e-07,42;CL:0002057,9.15e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.50e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:12603;4.25e-08;1!DOID:2355;7.59e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.40e-08,1;DOID:2355,7.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.47e-17!102;UBERON:0003061!2.47e-17!102;UBERON:0002193!6.49e-17!112;UBERON:0002371!1.32e-13!80;UBERON:0002405!3.27e-13!115;UBERON:0001474!4.77e-12!86;UBERON:0000166!1.19e-09!21;UBERON:0004765!5.08e-09!101;UBERON:0001434!5.08e-09!101;UBERON:0003729!7.45e-09!5;UBERON:0000165!8.10e-08!28;UBERON:0000930!8.10e-08!28;UBERON:0000974!9.48e-08!10;UBERON:0003343!2.66e-07!4;UBERON:0004785!2.66e-07!4 | |ontology_enrichment_uberon=UBERON:0002390!2.47e-17!102;UBERON:0003061!2.47e-17!102;UBERON:0002193!6.49e-17!112;UBERON:0002371!1.32e-13!80;UBERON:0002405!3.27e-13!115;UBERON:0001474!4.77e-12!86;UBERON:0000166!1.19e-09!21;UBERON:0004765!5.08e-09!101;UBERON:0001434!5.08e-09!101;UBERON:0003729!7.45e-09!5;UBERON:0000165!8.10e-08!28;UBERON:0000930!8.10e-08!28;UBERON:0000974!9.48e-08!10;UBERON:0003343!2.66e-07!4;UBERON:0004785!2.66e-07!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73100543109634,4.76183418809685,4.171671409625,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0.142169232487422,0.587200878669695,1.66198622559563,1.00272223735071,1.30206522429511,0,0,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0.344745680736619,1.93645405075148,1.35426486594342,0,0.545812300115692,0.898893937780338,0,0,1.27867425159808,0,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0.348259474598534,0.531831842075461,29.8113280381677,34.3196946468077,41.9746976502408,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,2.22963810150862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,5.6619010512092,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,1.95193241990045,0.230850775511391,0,0.922255617552241,0.718061155278177,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.290268993867255,0.365446585430928,0,0.969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0.288109595976299,0,7.77790314235425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0,0.137539436597234,0,14.6233029508475,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,6.38341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,1.72992536041486,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74813611802872,0.11796972334774,0.366857197043358,0.462102664601353,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,16.4784602204764,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,1.0243108625637,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,12.7924679583909,0.357107877211315,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.710478008196067,0.31037357147929,0.112131862580613,0.0636471582781649,0,0.653150243690884,0.342233301085281,0.740872583160463,0,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0.961705476909699 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73100543109634,4.76183418809685,4.171671409625,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0.142169232487422,0.587200878669695,1.66198622559563,1.00272223735071,1.30206522429511,0,0,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0.344745680736619,1.93645405075148,1.35426486594342,0,0.545812300115692,0.898893937780338,0,0,1.27867425159808,0,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0.348259474598534,0.531831842075461,29.8113280381677,34.3196946468077,41.9746976502408,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,2.22963810150862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,5.6619010512092,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,1.95193241990045,0.230850775511391,0,0.922255617552241,0.718061155278177,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.290268993867255,0.365446585430928,0,0.969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0.288109595976299,0,7.77790314235425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0,0.137539436597234,0,14.6233029508475,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,6.38341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,1.72992536041486,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74813611802872,0.11796972334774,0.366857197043358,0.462102664601353,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,16.4784602204764,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,1.0243108625637,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,12.7924679583909,0.357107877211315,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.710478008196067,0.31037357147929,0.112131862580613,0.0636471582781649,0,0.653150243690884,0.342233301085281,0.740872583160463,0,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0.961705476909699 | ||
|short_description=p5@DNASE1L3 | |short_description=p5@DNASE1L3 | ||
}} | }} |
Latest revision as of 05:15, 19 September 2015
Short description: | p5@DNASE1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DNASE1L3_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 71bp_to_ENST00000318316, ENST00000460422, NM_004944, uc003djp.1_5end |
EntrezGene: | DNASE1L3 |
HGNC: | 2959 |
UniProt: | Q13609C9J0L2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.62e-22 | 3 |
dendritic cell | 7.61e-16 | 10 |
CD1a-positive Langerhans cell | 7.40e-15 | 2 |
immature CD1a-positive Langerhans cell | 7.40e-15 | 2 |
leukocyte | 6.05e-14 | 136 |
immature conventional dendritic cell | 4.77e-11 | 5 |
common dendritic progenitor | 4.77e-11 | 5 |
hematopoietic lineage restricted progenitor cell | 5.90e-11 | 120 |
hematopoietic stem cell | 1.37e-10 | 168 |
nongranular leukocyte | 5.89e-10 | 115 |
hematopoietic cell | 7.28e-10 | 177 |
lymphocyte of B lineage | 9.63e-10 | 24 |
pro-B cell | 9.63e-10 | 24 |
acinar cell of salivary gland | 1.40e-09 | 3 |
macrophage dendritic cell progenitor | 5.58e-09 | 61 |
hematopoietic oligopotent progenitor cell | 1.53e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-08 | 161 |
antibody secreting cell | 2.04e-08 | 1 |
plasma cell | 2.04e-08 | 1 |
plasmablast | 2.04e-08 | 1 |
granulocyte monocyte progenitor cell | 4.84e-08 | 67 |
conventional dendritic cell | 1.63e-07 | 8 |
intermediate monocyte | 5.14e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.14e-07 | 9 |
classical monocyte | 9.15e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.15e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.54e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.40e-08 | 1 |
anemia | 7.10e-08 | 1 |