FFCP PHASE1:Hg19::chr4:187810460..187810481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:187810460..187810481,+ | |||
|coexpression_cluster_id=C4401 | |||
|description=CAGE_peak_at_chr4:187810460..187810481,+ | |description=CAGE_peak_at_chr4:187810460..187810481,+ | ||
|id=chr4:187810460..187810481,+ | |id=chr4:187810460..187810481,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.47e-41!5;CL:0000540!2.78e-12!6;CL:0000031!2.78e-12!6;CL:0000404!2.78e-12!6;CL:0000039!9.43e-11!7;CL:0000586!9.43e-11!7;CL:0000047!2.41e-09!8;CL:0000148!5.21e-08!10;CL:0000541!5.21e-08!10 | |ontology_enrichment_celltype=CL:0002322!3.47e-41!5;CL:0000540!2.78e-12!6;CL:0000031!2.78e-12!6;CL:0000404!2.78e-12!6;CL:0000039!9.43e-11!7;CL:0000586!9.43e-11!7;CL:0000047!2.41e-09!8;CL:0000148!5.21e-08!10;CL:0000541!5.21e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.43e-66;5!CL:0002321;3.11e-22;15!CL:0000148;1.09e-12;10!CL:0000147;3.16e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.62e-66,5;CL:0000148,1.09e-12,10;CL:0000541,1.09e-12,10;CL:0000147,3.16e-09,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.43e-16!8;DOID:0060085!4.87e-09!1;DOID:3165!4.87e-09!1;DOID:0060121!4.87e-09!1;DOID:2438!4.87e-09!1;DOID:4418!4.87e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.01e-26;8!DOID:1240;2.33e-08;39!DOID:3910;7.03e-08;2!DOID:8692;2.49e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.16e-26,8;DOID:1240,1.76e-08,39;DOID:3910,6.58e-08,2;DOID:8692,4.37e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001282!2.77e-09!1;UBERON:0009842!2.77e-09!1;UBERON:0003704!2.77e-09!1;UBERON:0001171!2.77e-09!1;UBERON:0001172!2.77e-09!1 | |ontology_enrichment_uberon=UBERON:0001282!2.77e-09!1;UBERON:0009842!2.77e-09!1;UBERON:0003704!2.77e-09!1;UBERON:0001171!2.77e-09!1;UBERON:0001172!2.77e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.03e-08;2!UBERON:0002173;7.03e-08;2!UBERON:0002186;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.58e-08,2;UBERON:0002173,6.58e-08,2;UBERON:0002186,6.58e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75697453905422,2.65059536642971,4.53156377191122,3.42081481550722,3.5324919122588,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1234052182667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0.69169171316418,0,2.49888955420619,0,0,0,0,0,0,2.70714792740617,2.35275041181287,2.18168063068596,8.15941050713996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75576083516354,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.825236619583403,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37133958277533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75697453905422,2.65059536642971,4.53156377191122,3.42081481550722,3.5324919122588,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1234052182667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0.69169171316418,0,2.49888955420619,0,0,0,0,0,0,2.70714792740617,2.35275041181287,2.18168063068596,8.15941050713996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75576083516354,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.825236619583403,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37133958277533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:187810460..187810481,+ | |short_description=p@chr4:187810460..187810481,+ | ||
}} | }} |
Latest revision as of 04:11, 30 July 2015
Short description: | p@chr4:187810460..187810481, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:187810460..187810481, + |
Coexpression cluster: | C4401_chronic_adult_fibrosarcoma_H9_lymphangiectasia_bronchioalveolar_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.62e-66 | 5 |
melanocyte | 1.09e-12 | 10 |
melanoblast | 1.09e-12 | 10 |
pigment cell | 3.16e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.58e-08 | 2 |
alveolar duct | 6.58e-08 | 2 |
bronchiole | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.16e-26 | 8 |
leukemia | 1.76e-08 | 39 |
lung adenocarcinoma | 6.58e-08 | 2 |
myeloid leukemia | 4.37e-07 | 31 |