FFCP PHASE1:Hg19::chr15:42566613..42566675,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:42566613..42566675,+
|short_description=p5@GANC
|description=CAGE_peak_5_at_GANC_5end
|association_with_transcript=173bp_to_ENST00000318010,ENST0000044061...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2595 | |EntrezGene=2595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4139 | |HGNC=4139 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TET4,E7EWB6 | |UniProt=Q8TET4,E7EWB6 | ||
|association_with_transcript=173bp_to_ENST00000318010,ENST00000440615_5end | |||
|cluster_id=chr15:42566613..42566675,+ | |||
|coexpression_cluster_id=C2333 | |||
|description=CAGE_peak_5_at_GANC_5end | |||
|id=chr15:42566613..42566675,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.03e-08!75;CL:0000055!7.73e-08!180;CL:0002620!3.14e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.33e-08;23!CL:0002334;4.87e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.18e-09,76;CL:0002620,1.68e-08,23;CL:0002334,4.23e-07,12;CL:0002368,7.61e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!9.13e-15!95;UBERON:0002199!4.18e-09!45;UBERON:0002416!4.18e-09!45;UBERON:0002097!9.31e-09!40;UBERON:0001004!1.07e-07!72;UBERON:0000486!5.57e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.01e-07;41!UBERON:0002199;1.79e-07;46!UBERON:0002416;1.79e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.87e-16,99;UBERON:0002199,8.36e-10,46;UBERON:0002416,8.36e-10,46;UBERON:0002097,1.70e-09,41;UBERON:0001004,5.04e-08,74 | |||
|phase1_expression=2.54349730978779,1.2846031433459,3.52386010239928,2.00146596706261,2.68176656656373,2.61701557230111,2.53299878168311,1.26343974685366,0.522371256399677,1.72013755551056,0,1.09220686065086,0.791300934685361,1.11389717664042,0.994192127183747,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,0.61560529038394,0,0.313454721478088,1.14494394852423,0.958120975510189,0.502170558379211,0.305653622991805,0.0821005894499457,0.314843125254717,0.393364276848904,0,0,7.35536979583142,2.71085326900425,1.84877005083394,0,0.426507697462265,0.293600439334847,0,0.200544447470142,0.217010870715852,0.895661896959697,0.32389366601898,0.77272670290256,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0,0,0,0.689491361473237,1.29096936716765,0,0.376484679085209,0.818718450173537,0,1.22433556948361,0.641858054152187,0,0,0.199463657621632,0,0,1.13477044938228,0.622822248995575,0,0,0,0,0.368277635987565,0.949387162322653,0.211255286311942,0.425208599930087,0.209658645508376,0.336985893439485,0.450530678524519,0.48217676009124,0,0,0.547992461293902,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,1.84368859342554,0,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0.891283655081389,0.294605907474837,0,0.812411591295047,0.896639238079726,0.910415432919148,0.493313713811028,0.276350017785848,0,0.444859689486181,0,0,0.113309342697566,0,0.34362744548263,1.01207876807801,0.637130828648193,0,0,0,0.255973222308837,1.24930726552346,0,0,0.201606743224732,0,0.144824403882799,4.87613732627923,1.34140171940727,0.383587685530591,2.53007406669196,0.50133791063589,1.01392563272577,2.3858578411533,1.94653948121054,0.661743720148475,0.665188192387692,0.175669571386252,1.37528029272598,2.91436230634034,3.70784442784429,1.29818957461873,0.522389211897802,1.32957960518865,0,0.571994910780128,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0.550236083880135,0.208994966536811,1.29208379584664,0.71153252537342,1.00416183829401,0.805658634218294,0,0.488124115096339,0.735326160691737,0.81014194788176,1.07159673940896,1.34717623575702,0.675668882899933,0,0,0.183201743930407,0,0,3.92484646928281,3.47880366186723,3.03913227994991,10.3279161034311,4.87622255272983,1.77334191099179,0,0,0,0.622422070799533,0.67355336034844,0.490385709340376,0.756787138224657,0.576175924479999,0.468642863667593,1.87296046098192,1.1409436430889,2.98897361103602,2.46612447151906,1.13311061057692,2.10676210053373,3.0623125688234,0.61417158655884,1.54988671763648,4.75201142912821,1.23633464639278,0.910161361938026,0,1.5150250255866,0.125118519871964,3.3247693858102,3.95079858792754,4.29082914118628,0.751190294532984,1.24775401476023,18.2977428402639,4.27114777637135,3.81477422087211,15.9048280924733,4.74041634496819,11.0785432219621,6.51408997160564,25.1476735039487,13.0565586916006,29.0298840380732,3.86609574297657,0.161646056818812,30.5308249564288,16.9263525022436,7.12154487704048,10.436086070818,10.0916064618609,11.1853792201711,0.487894824518382,0.265059536642971,0.929551542956147,0.414644220061482,0.756962552626885,0,1.56449532329816,0.643240938192885,1.38134921352481,2.78620756819187,2.16563844500876,2.9576700009961,3.54027849164014,1.44606617930089,3.08823123650703,2.83243277320128,3.08451804844426,2.56179485504312,5.49420102350969,4.61696588335668,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0.441463099414651,3.44367627920718,0.343135620597051,11.7432805387229,4.49607013030478,15.3809327789795,4.16648003213383,0.651616610620649,0,1.44331342025273,0.927443239800615,0.352226082707465,0.577465791044295,0.925971025153221,0.570762456703795,0,0,1.47730203652438,0.936017060556951,1.18904929830983,11.2480600784132,15.7903200506928,13.8939595297539,10.3887886335304,8.13775027839093,4.60059214998253,4.92663237895944,2.20121085033065,1.03664057770386,1.58531948758658,0.6312121671319,1.8414389344729,1.14596527667483,2.34434894420094,0,1.7480673759565,2.40274446275134,3.42991719156694,0.224262168690721,0,0.4400297149257,1.03417372606222,0,1.690605505112,1.06375246633948,0,0,1.41849132023278,0,0.285955987316295,0,0,1.95441710576241,0.710783897485092,0,1.20575750823834,0.871533458600294,0.499864955910285,0,1.50677127429638,0,1.91699884393266,0,2.85273810081437,1.73737568001095,1.02738161275192,1.61154866915906,0.112085143993527,0.394061520403854,0,0.128343036279748,1.01637849688985,0,0,0.502548796003046,0.637938751653163,0,0,0,0.981531933753119,0,0.542530047399471,2.07970861530807,4.63915370872621,3.15404830067869,1.87426263988341,0.601892199455438,0,0,1.99267679560631,1.29058417979192,5.82120216936155,0.195801157462741,0,0.206768026122887,0.431428401637234,0.213455115606889,1.21251028578504,0,0,5.21026396419431,13.9650395692137,2.52594084989766,3.45975702990393,5.62877973973374,4.18220194973379,2.96836132889982,2.15893571323718,2.84098760501003,5.50251945292521,2.59627214591811,4.2997840030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| ||
|short_description=p5@GANC | |||
}} | }} |
Latest revision as of 15:50, 17 September 2015
Short description: | p5@GANC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GANC_5end |
Coexpression cluster: | C2333_Small_Fibroblast_skeletal_basal_Sebocyte_Mallassezderived_Keratinocyte |
Association with transcript: | 173bp_to_ENST00000318010, ENST00000440615_5end |
EntrezGene: | GANC |
HGNC: | 4139 |
UniProt: | Q8TET4E7EWB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.18e-09 | 76 |
skin fibroblast | 1.68e-08 | 23 |
preadipocyte | 4.23e-07 | 12 |
respiratory epithelial cell | 7.61e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.87e-16 | 99 |
integument | 8.36e-10 | 46 |
integumental system | 8.36e-10 | 46 |
skin of body | 1.70e-09 | 41 |
respiratory system | 5.04e-08 | 74 |