FFCP PHASE1:Hg19::chr5:180670891..180670921,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10399 | |EntrezGene=10399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4399 | |HGNC=4399 | ||
|TSSclassifier=strong | |||
|UniProt=P63244,E9PD14,D6RBD0,D6RHJ5,D6RGK8,D6RAU2,D6RDI0,D6REE5,D6RFZ9,E9KL35 | |UniProt=P63244,E9PD14,D6RBD0,D6RHJ5,D6RGK8,D6RAU2,D6RDI0,D6REE5,D6RFZ9,E9KL35 | ||
|association_with_transcript=0bp_to_ENST00000376817,ENST00000456394,ENST00000502548,ENST00000503081,ENST00000503170,ENST00000504726,ENST00000505461,ENST00000506312,ENST00000507261,ENST00000508682,ENST00000508963,ENST00000511473,ENST00000512968,ENST00000513027,ENST00000514318,NM_006098,uc003mni.1,uc003mnj.1,uc003mnk.1,uc011dhk.1,uc011dhl.1_5end | |association_with_transcript=0bp_to_ENST00000376817,ENST00000456394,ENST00000502548,ENST00000503081,ENST00000503170,ENST00000504726,ENST00000505461,ENST00000506312,ENST00000507261,ENST00000508682,ENST00000508963,ENST00000511473,ENST00000512968,ENST00000513027,ENST00000514318,NM_006098,uc003mni.1,uc003mnj.1,uc003mnk.1,uc011dhk.1,uc011dhl.1_5end | ||
|cluster_id=chr5:180670891..180670921,- | |||
|description=CAGE_peak_1_at_GNB2L1_5end | |description=CAGE_peak_1_at_GNB2L1_5end | ||
|id=chr5:180670891..180670921,- | |id=chr5:180670891..180670921,- | ||
|ontology_enrichment_celltype=CL:0000012!6.51e-22!682;CL:0000548!2.69e-20!679;CL:0000004!2.69e-20!679;CL:0000255!2.69e-20!679;CL:0000144!8.91e-18!625;CL:0000003!1.85e-16!722;CL:0002371!9.19e-14!591;CL:0002321!1.62e-10!248;CL:0000220!2.64e-10!246;CL:0000066!3.79e-08!254;CL:0000183!1.31e-07!59;CL:0000222!1.46e-07!119;CL:0000838!2.53e-07!52;CL:0000542!3.26e-07!53;CL:0000051!3.26e-07!53;CL:0000063!4.15e-07!578 | |ontology_enrichment_celltype=CL:0000012!6.51e-22!682;CL:0000548!2.69e-20!679;CL:0000004!2.69e-20!679;CL:0000255!2.69e-20!679;CL:0000144!8.91e-18!625;CL:0000003!1.85e-16!722;CL:0002371!9.19e-14!591;CL:0002321!1.62e-10!248;CL:0000220!2.64e-10!246;CL:0000066!3.79e-08!254;CL:0000183!1.31e-07!59;CL:0000222!1.46e-07!119;CL:0000838!2.53e-07!52;CL:0000542!3.26e-07!53;CL:0000051!3.26e-07!53;CL:0000063!4.15e-07!578 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.00e-11,250;CL:0000222,5.42e-08,121;CL:0000066,6.54e-08,253;CL:0000838,2.53e-07,52;CL:0000542,3.26e-07,53;CL:0000051,3.26e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.28e-08,78 | |||
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| ||
|short_description=p1@GNB2L1 | |short_description=p1@GNB2L1 | ||
}} | }} |
Latest revision as of 12:05, 17 September 2015
Short description: | p1@GNB2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNB2L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376817, ENST00000456394, ENST00000502548, ENST00000503081, ENST00000503170, ENST00000504726, ENST00000505461, ENST00000506312, ENST00000507261, ENST00000508682, ENST00000508963, ENST00000511473, ENST00000512968, ENST00000513027, ENST00000514318, NM_006098, uc003mni.1, uc003mnj.1, uc003mnk.1, uc011dhk.1, uc011dhl.1_5end |
EntrezGene: | GNB2L1 |
HGNC: | 4399 |
UniProt: | P63244E9PD14D6RBD0D6RHJ5D6RGK8D6RAU2D6RDI0D6REE5D6RFZ9E9KL35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.00e-11 | 250 |
mesodermal cell | 5.42e-08 | 121 |
epithelial cell | 6.54e-08 | 253 |
lymphoid lineage restricted progenitor cell | 2.53e-07 | 52 |
lymphocyte | 3.26e-07 | 53 |
common lymphoid progenitor | 3.26e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.28e-08 | 78 |