FFCP PHASE1:Hg19::chr6:11416728..11416731,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:11416728..11416731,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr6:11416728..11416731,- | |description=CAGE_peak_at_chr6:11416728..11416731,- | ||
|id=chr6:11416728..11416731,- | |id=chr6:11416728..11416731,- | ||
|ontology_enrichment_celltype=CL:0000860!2.49e-31!45;CL:0002057!2.54e-26!42;CL:0000766!4.24e-20!76;CL:0002194!7.10e-20!63;CL:0000576!7.10e-20!63;CL:0000040!7.10e-20!63;CL:0000559!7.10e-20!63;CL:0002009!4.66e-19!65;CL:0000839!3.19e-17!70;CL:0000557!6.92e-17!71;CL:0002087!2.29e-16!119;CL:0000738!7.63e-16!140;CL:0002031!3.76e-14!124;CL:0000988!1.84e-12!182;CL:0000763!3.09e-12!112;CL:0000049!3.09e-12!112;CL:0000037!6.02e-12!172;CL:0000566!6.02e-12!172;CL:0002032!6.86e-12!165;CL:0000837!6.86e-12!165;CL:0002541!1.18e-08!3;CL:0002150!1.06e-07!3;CL:0000861!1.06e-07!3 | |ontology_enrichment_celltype=CL:0000860!2.49e-31!45;CL:0002057!2.54e-26!42;CL:0000766!4.24e-20!76;CL:0002194!7.10e-20!63;CL:0000576!7.10e-20!63;CL:0000040!7.10e-20!63;CL:0000559!7.10e-20!63;CL:0002009!4.66e-19!65;CL:0000839!3.19e-17!70;CL:0000557!6.92e-17!71;CL:0002087!2.29e-16!119;CL:0000738!7.63e-16!140;CL:0002031!3.76e-14!124;CL:0000988!1.84e-12!182;CL:0000763!3.09e-12!112;CL:0000049!3.09e-12!112;CL:0000037!6.02e-12!172;CL:0000566!6.02e-12!172;CL:0002032!6.86e-12!165;CL:0000837!6.86e-12!165;CL:0002541!1.18e-08!3;CL:0002150!1.06e-07!3;CL:0000861!1.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000771;2.45e-12;2!CL:0002535;2.45e-12;2!CL:0000860;1.13e-10;33!CL:0002057;1.13e-10;33!CL:0000322;1.17e-08;3!CL:0000473;2.26e-08;39!CL:0000234;2.26e-08;39!CL:0000576;4.14e-08;48!CL:0000766;7.96e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.00e-13,42;CL:0002057,3.00e-13,42;CL:0002535,1.65e-12,2;CL:0000771,2.32e-12,2;CL:0000473,1.28e-11,48;CL:0000234,1.28e-11,48;CL:0000766,7.70e-11,72;CL:0002194,2.51e-09,59;CL:0000576,2.51e-09,59;CL:0000040,2.51e-09,59;CL:0000559,2.51e-09,59;CL:0002009,4.98e-09,61;CL:0000322,1.30e-08,3;CL:0000839,2.30e-08,66;CL:0000557,3.04e-08,67;CL:0000763,3.08e-07,108;CL:0000049,3.08e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.01e-14!80;UBERON:0002390!5.26e-13!102;UBERON:0003061!5.26e-13!102;UBERON:0001474!8.41e-13!86;UBERON:0002405!1.29e-11!115;UBERON:0002193!3.32e-11!112;UBERON:0004765!6.09e-11!101;UBERON:0001434!6.09e-11!101;UBERON:0005631!1.08e-10!14;UBERON:0000158!1.08e-10!14;UBERON:0003124!4.23e-09!7;UBERON:0000476!1.18e-08!3;UBERON:0000920!1.18e-08!3;UBERON:0000478!3.54e-07!24;UBERON:0003081!3.74e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!3.01e-14!80;UBERON:0002390!5.26e-13!102;UBERON:0003061!5.26e-13!102;UBERON:0001474!8.41e-13!86;UBERON:0002405!1.29e-11!115;UBERON:0002193!3.32e-11!112;UBERON:0004765!6.09e-11!101;UBERON:0001434!6.09e-11!101;UBERON:0005631!1.08e-10!14;UBERON:0000158!1.08e-10!14;UBERON:0003124!4.23e-09!7;UBERON:0000476!1.18e-08!3;UBERON:0000920!1.18e-08!3;UBERON:0000478!3.54e-07!24;UBERON:0003081!3.74e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.45e-12;2!UBERON:0006955;2.45e-12;2!UBERON:0004801;2.45e-12;2!UBERON:0002173;2.45e-12;2!UBERON:0002186;2.45e-12;2!UBERON:0004821;1.17e-08;3!UBERON:0007499;1.17e-08;3!UBERON:0003215;1.17e-08;3!UBERON:0010368;1.17e-08;3!UBERON:0009911;1.17e-08;3!UBERON:0002299;1.17e-08;3!UBERON:0006524;1.17e-08;3!UBERON:0008874;1.17e-08;3!UBERON:0002169;1.17e-08;3!UBERON:0004894;1.17e-08;3!UBERON:0009856;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.65e-12,2;UBERON:0004801,1.65e-12,2;UBERON:0004903,2.90e-12,2;UBERON:0002173,2.90e-12,2;UBERON:0002186,2.90e-12,2;UBERON:0004821,1.30e-08,3;UBERON:0003215,1.30e-08,3;UBERON:0010368,1.30e-08,3;UBERON:0009911,1.30e-08,3;UBERON:0002299,1.30e-08,3;UBERON:0006524,1.30e-08,3;UBERON:0008874,1.30e-08,3;UBERON:0002169,1.30e-08,3;UBERON:0004894,1.30e-08,3;UBERON:0002371,2.73e-07,76;UBERON:0001474,9.07e-07,82 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,1.51907609501096,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.863077176966451,0.256160706529101,0.709446689665756,1.03423704220986,0.645484683583826,0,0,0,0.449446968890169,0.918251677112708,0,1.27867425159808,0,0.398927315243264,0.426224750532694,0,0,1.24564449799115,0.251248665256743,0.521482918420201,1.73751075764093,0,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,5.71228993775072,0,0,0,0,0,0,0,0,0,1.82824333818845,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.803892390468535,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:11416728..11416731,- | |short_description=p@chr6:11416728..11416731,- | ||
}} | }} |
Latest revision as of 18:32, 30 July 2015
Short description: | p@chr6:11416728..11416731, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:11416728..11416731, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.00e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.00e-13 | 42 |
epithelial cell of cervix | 1.65e-12 | 2 |
eosinophil | 2.32e-12 | 2 |
defensive cell | 1.28e-11 | 48 |
phagocyte | 1.28e-11 | 48 |
myeloid leukocyte | 7.70e-11 | 72 |
monopoietic cell | 2.51e-09 | 59 |
monocyte | 2.51e-09 | 59 |
monoblast | 2.51e-09 | 59 |
promonocyte | 2.51e-09 | 59 |
macrophage dendritic cell progenitor | 4.98e-09 | 61 |
pneumocyte | 1.30e-08 | 3 |
myeloid lineage restricted progenitor cell | 2.30e-08 | 66 |
granulocyte monocyte progenitor cell | 3.04e-08 | 67 |
myeloid cell | 3.08e-07 | 108 |
common myeloid progenitor | 3.08e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.65e-12 | 2 |
cervix epithelium | 1.65e-12 | 2 |
bronchoalveolar duct junction | 2.90e-12 | 2 |
alveolar duct | 2.90e-12 | 2 |
bronchiole | 2.90e-12 | 2 |
pulmonary alveolus epithelium | 1.30e-08 | 3 |
alveolus | 1.30e-08 | 3 |
pulmonary lobule | 1.30e-08 | 3 |
lobule | 1.30e-08 | 3 |
alveolus of lung | 1.30e-08 | 3 |
alveolar system | 1.30e-08 | 3 |
pulmonary acinus | 1.30e-08 | 3 |
alveolar sac | 1.30e-08 | 3 |
alveolar wall | 1.30e-08 | 3 |
bone marrow | 2.73e-07 | 76 |
bone element | 9.07e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.90e-12 | 2 |