FFCP PHASE1:Hg19::chr15:65935213..65935234,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:65935213..65935234,+
|short_description=p8@SLC24A1
|description=CAGE_peak_8_at_SLC24A1_5end
|association_with_transcript=-8bp_to_ENST00000449142,NM_001254...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9187 | |EntrezGene=9187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10975 | |HGNC=10975 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000449142,NM_001254740,uc010uji.1_5end | |||
|cluster_id=chr15:65935213..65935234,+ | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_8_at_SLC24A1_5end | |||
|id=chr15:65935213..65935234,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.06e-16!24;CL:0000213!1.42e-12!57;CL:0000215!1.42e-12!57;CL:0000071!7.18e-12!18;CL:0002546!7.18e-12!18;CL:0000115!8.18e-12!35;CL:0000076!9.12e-10!62;CL:1000413!3.45e-09!9;CL:0002144!1.20e-08!3;CL:0002078!1.36e-08!44;CL:0002166!5.32e-08!3;CL:0002544!6.34e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002144;5.58e-44;3!CL:0000071;2.34e-38;18!CL:0002139;1.09e-28;24!CL:0002544;5.40e-22;6!CL:0002621;8.66e-20;3!CL:0000115;5.22e-15;36!CL:1000413;6.84e-15;9!CL:0002078;9.91e-12;45!CL:0000213;1.02e-08;58!CL:0000215;1.02e-08;58!CL:0002545;1.55e-08;2!CL:0000076;8.15e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,4.49e-44,3;CL:0000071,3.02e-38,18;CL:0002546,3.02e-38,18;CL:0002139,1.31e-28,24;CL:0002544,7.72e-22,6;CL:0002621,7.16e-20,3;CL:0000115,6.03e-19,36;CL:0002078,4.54e-15,45;CL:1000413,8.67e-15,9;CL:0000213,1.39e-11,58;CL:0000215,1.39e-11,58;CL:0000076,1.27e-10,63;CL:0002545,1.61e-08,2;CL:0002321,7.73e-07,250;CL:0000066,8.33e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;2.34e-38;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.18e-12!18;UBERON:0004638!7.18e-12!18;UBERON:0004852!7.18e-12!18;UBERON:0000487!2.85e-09!22;UBERON:0003915!3.45e-09!9;UBERON:0004700!3.45e-09!9;UBERON:0001917!3.45e-09!9;UBERON:0001915!1.20e-08!3;UBERON:0001982!1.20e-08!3;UBERON:0000055!2.18e-08!69;UBERON:0006914!7.03e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.58e-44;3!UBERON:0001915;5.58e-44;3!UBERON:0001982;5.58e-44;3!UBERON:0004638;2.34e-38;18!UBERON:0001986;2.34e-38;18!UBERON:0004852;2.34e-38;18!UBERON:0000487;2.50e-31;22!UBERON:0006914;1.58e-27;25!UBERON:0001949;8.66e-20;3!UBERON:0000490;2.53e-18;33!UBERON:0002426;2.38e-15;1!UBERON:0003831;2.38e-15;1!UBERON:0003898;2.38e-15;1!UBERON:0004830;2.38e-15;1!UBERON:0003830;2.38e-15;1!UBERON:0005175;2.38e-15;1!UBERON:0001774;2.38e-15;1!UBERON:0001103;2.38e-15;1!UBERON:0003915;6.84e-15;9!UBERON:0004700;6.84e-15;9!UBERON:0001917;6.84e-15;9!UBERON:0007500;4.89e-10;56!UBERON:0001981;4.89e-10;56!UBERON:0004537;4.89e-10;56!UBERON:0003929;4.95e-09;7!UBERON:0005800;1.55e-08;2!UBERON:0001515;1.55e-08;2!UBERON:0005090;2.48e-08;2!UBERON:0001630;2.48e-08;2!UBERON:0003350;5.18e-08;8!UBERON:0001828;5.18e-08;8!UBERON:0003914;3.09e-07;74!UBERON:0000055;9.11e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.49e-44,3;UBERON:0001915,4.49e-44,3;UBERON:0001982,4.49e-44,3;UBERON:0004638,3.02e-38,18;UBERON:0001986,3.02e-38,18;UBERON:0004852,3.02e-38,18;UBERON:0000487,3.07e-31,22;UBERON:0006914,1.89e-27,25;UBERON:0001949,7.16e-20,3;UBERON:0002426,1.54e-15,1;UBERON:0003831,1.54e-15,1;UBERON:0003898,1.54e-15,1;UBERON:0004830,1.54e-15,1;UBERON:0003830,1.54e-15,1;UBERON:0005175,1.54e-15,1;UBERON:0001774,1.54e-15,1;UBERON:0001103,1.54e-15,1;UBERON:0010084,1.54e-15,1;UBERON:0003915,8.67e-15,9;UBERON:0004700,8.67e-15,9;UBERON:0001917,8.67e-15,9;UBERON:0007500,2.23e-11,59;UBERON:0001981,2.23e-11,59;UBERON:0004537,2.23e-11,59;UBERON:0006965,2.23e-11,59;UBERON:0000055,8.38e-10,68;UBERON:0005800,1.61e-08,2;UBERON:0001515,1.61e-08,2;UBERON:0002049,1.78e-08,78;UBERON:0007798,1.78e-08,78;UBERON:0005090,2.00e-08,2;UBERON:0001630,2.00e-08,2;UBERON:0003350,4.83e-08,8;UBERON:0001828,4.83e-08,8;UBERON:0004872,6.22e-08,83 | |||
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| ||
|short_description=p8@SLC24A1 | |||
}} | }} |
Latest revision as of 15:34, 18 September 2015
Short description: | p8@SLC24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC24A1_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | -8bp_to_ENST00000449142, NM_001254740, uc010uji.1_5end |
EntrezGene: | SLC24A1 |
HGNC: | 10975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 4.49e-44 | 3 |
blood vessel endothelial cell | 3.02e-38 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.02e-38 | 18 |
endothelial cell of vascular tree | 1.31e-28 | 24 |
aortic endothelial cell | 7.72e-22 | 6 |
gingival epithelial cell | 7.16e-20 | 3 |
endothelial cell | 6.03e-19 | 36 |
meso-epithelial cell | 4.54e-15 | 45 |
endothelial cell of artery | 8.67e-15 | 9 |
lining cell | 1.39e-11 | 58 |
barrier cell | 1.39e-11 | 58 |
squamous epithelial cell | 1.27e-10 | 63 |
thoracic aorta endothelial cell | 1.61e-08 | 2 |
embryonic cell | 7.73e-07 | 250 |
epithelial cell | 8.33e-07 | 253 |