FFCP PHASE1:Hg19::chr6:84141528..84141537,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:84141528..84141537,- | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr6:84141528..84141537,- | |description=CAGE_peak_at_chr6:84141528..84141537,- | ||
|id=chr6:84141528..84141537,- | |id=chr6:84141528..84141537,- | ||
|ontology_enrichment_celltype=CL:0000167!8.91e-10!1;CL:0000164!8.91e-10!1;CL:0000502!8.91e-10!1;CL:0000172!8.91e-10!1;CL:0000173!8.91e-10!1;CL:0002351!8.91e-10!1;CL:0002563!1.10e-09!4 | |ontology_enrichment_celltype=CL:0000167!8.91e-10!1;CL:0000164!8.91e-10!1;CL:0000502!8.91e-10!1;CL:0000172!8.91e-10!1;CL:0000173!8.91e-10!1;CL:0002351!8.91e-10!1;CL:0002563!1.10e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;6.60e-50;4!CL:0002253;7.14e-26;2!CL:0002231;6.76e-18;3!CL:0002076;4.99e-12;42!CL:0002251;6.00e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.14e-50,4;CL:0002253,7.14e-26,2;CL:0002231,6.76e-18,3;CL:0002076,1.56e-11,42;CL:0002251,5.70e-11,20;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.21e-07;31 | |||
|ontology_enrichment_disease=DOID:3119!6.23e-10!14;DOID:4430!8.91e-10!1;DOID:178!9.70e-10!1;DOID:326!9.70e-10!1;DOID:3978!9.70e-10!1;DOID:3394!9.70e-10!1;DOID:5844!9.70e-10!1;DOID:0050619!1.36e-09!1;DOID:1357!1.36e-09!1;DOID:299!3.00e-08!25;DOID:305!1.14e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.66e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.93e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0005409!6.78e-11!35;UBERON:0000160!1.22e-10!27;UBERON:0001242!1.10e-09!4;UBERON:0001262!1.10e-09!4;UBERON:0004786!1.10e-09!4;UBERON:0004808!1.10e-09!4;UBERON:0001277!1.10e-09!4;UBERON:0001052!1.20e-09!4;UBERON:0001764!1.36e-09!1;UBERON:0001825!1.36e-09!1;UBERON:0002372!1.76e-09!1;UBERON:0001961!1.76e-09!1;UBERON:0001744!1.76e-09!1;UBERON:0001735!1.76e-09!1;UBERON:0000997!2.26e-09!1;UBERON:0005056!2.26e-09!1;UBERON:0004921!1.12e-08!129;UBERON:0004185!1.12e-08!129;UBERON:0003350!6.51e-08!5;UBERON:0004907!6.97e-08!5;UBERON:0000059!1.22e-07!11;UBERON:0000344!6.24e-07!12;UBERON:0001007!7.42e-07!155;UBERON:0001555!7.42e-07!155;UBERON:0007026!7.42e-07!155 | |ontology_enrichment_uberon=UBERON:0005409!6.78e-11!35;UBERON:0000160!1.22e-10!27;UBERON:0001242!1.10e-09!4;UBERON:0001262!1.10e-09!4;UBERON:0004786!1.10e-09!4;UBERON:0004808!1.10e-09!4;UBERON:0001277!1.10e-09!4;UBERON:0001052!1.20e-09!4;UBERON:0001764!1.36e-09!1;UBERON:0001825!1.36e-09!1;UBERON:0002372!1.76e-09!1;UBERON:0001961!1.76e-09!1;UBERON:0001744!1.76e-09!1;UBERON:0001735!1.76e-09!1;UBERON:0000997!2.26e-09!1;UBERON:0005056!2.26e-09!1;UBERON:0004921!1.12e-08!129;UBERON:0004185!1.12e-08!129;UBERON:0003350!6.51e-08!5;UBERON:0004907!6.97e-08!5;UBERON:0000059!1.22e-07!11;UBERON:0000344!6.24e-07!12;UBERON:0001007!7.42e-07!155;UBERON:0001555!7.42e-07!155;UBERON:0007026!7.42e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;6.60e-50;4!UBERON:0001242;6.60e-50;4!UBERON:0001262;6.60e-50;4!UBERON:0004786;6.60e-50;4!UBERON:0004808;6.60e-50;4!UBERON:0001277;6.60e-50;4!UBERON:0004907;3.31e-40;5!UBERON:0000485;4.21e-29;7!UBERON:0003929;4.21e-29;7!UBERON:0003350;1.26e-25;8!UBERON:0000160;1.81e-25;17!UBERON:0005409;3.62e-20;22!UBERON:0000059;5.63e-19;11!UBERON:0004921;1.77e-12;33!UBERON:0000344;6.00e-11;20!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.14e-50,4;UBERON:0001262,5.14e-50,4;UBERON:0004786,5.14e-50,4;UBERON:0004808,5.14e-50,4;UBERON:0001277,5.14e-50,4;UBERON:0001052,8.47e-50,4;UBERON:0004907,4.05e-40,5;UBERON:0003350,1.11e-25,8;UBERON:0000160,1.81e-25,17;UBERON:0001046,3.20e-24,19;UBERON:0000485,5.74e-23,9;UBERON:0000059,6.17e-19,11;UBERON:0005409,5.83e-18,25;UBERON:0000344,5.70e-11,20;UBERON:0003929,3.61e-09,54;UBERON:0004921,1.75e-07,118;UBERON:0001155,8.37e-07,9 | |||
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|short_description=p@chr6:84141528..84141537,- | |short_description=p@chr6:84141528..84141537,- | ||
}} | }} |
Latest revision as of 03:31, 31 July 2015
Short description: | p@chr6:84141528..84141537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:84141528..84141537, - |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.14e-50 | 4 |
epithelial cell of large intestine | 7.14e-26 | 2 |
epithelial cell of prostate | 6.76e-18 | 3 |
endo-epithelial cell | 1.56e-11 | 42 |
epithelial cell of alimentary canal | 5.70e-11 | 20 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.14e-50 | 4 |
wall of intestine | 5.14e-50 | 4 |
gastrointestinal system mucosa | 5.14e-50 | 4 |
gastrointestinal system epithelium | 5.14e-50 | 4 |
intestinal epithelium | 5.14e-50 | 4 |
rectum | 8.47e-50 | 4 |
lower digestive tract | 4.05e-40 | 5 |
epithelium of mucosa | 1.11e-25 | 8 |
intestine | 1.81e-25 | 17 |
hindgut | 3.20e-24 | 19 |
simple columnar epithelium | 5.74e-23 | 9 |
large intestine | 6.17e-19 | 11 |
gastrointestinal system | 5.83e-18 | 25 |
mucosa | 5.70e-11 | 20 |
gut epithelium | 3.61e-09 | 54 |
subdivision of digestive tract | 1.75e-07 | 118 |
colon | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.93e-15 | 14 |