FFCP PHASE1:Hg19::chr7:5462650..5462686,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:5462650..5462686,- | |||
|description=CAGE_peak_at_chr7:5462650..5462686,- | |description=CAGE_peak_at_chr7:5462650..5462686,- | ||
|id=chr7:5462650..5462686,- | |id=chr7:5462650..5462686,- | ||
|ontology_enrichment_celltype=CL:0000057!3.05e-18!75;CL:0000055!7.02e-16!180;CL:0002620!2.31e-12!23 | |ontology_enrichment_celltype=CL:0000057!3.05e-18!75;CL:0000055!7.02e-16!180;CL:0002620!2.31e-12!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.61e-20;23!CL:0000057;1.93e-11;73!CL:0002556;1.15e-07;6!CL:0002559;3.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-26,76;CL:0002620,2.10e-20,23;CL:0002556,9.32e-08,6;CL:0002559,3.53e-07,5;CL:0002552,6.26e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.92e-07;5!DOID:450;5.92e-07;5!DOID:66;5.92e-07;5!DOID:423;5.92e-07;5!DOID:0080000;5.92e-07;5!DOID:11722;5.92e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.70e-07,5;DOID:450,8.70e-07,5;DOID:66,8.70e-07,5;DOID:423,8.70e-07,5;DOID:0080000,8.70e-07,5;DOID:11722,8.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.43e-14!365;UBERON:0002346!9.72e-13!90;UBERON:0000924!1.08e-12!173;UBERON:0006601!1.08e-12!173;UBERON:0000153!2.40e-11!129;UBERON:0007811!2.40e-11!129;UBERON:0000033!2.69e-11!123;UBERON:0004121!3.15e-11!169;UBERON:0003075!5.58e-11!86;UBERON:0007284!5.58e-11!86;UBERON:0001869!9.84e-11!32;UBERON:0002020!1.10e-10!34;UBERON:0003528!1.10e-10!34;UBERON:0003080!1.77e-10!42;UBERON:0001893!1.80e-10!34;UBERON:0000468!2.04e-10!659;UBERON:0002780!2.63e-10!41;UBERON:0001890!2.63e-10!41;UBERON:0006240!2.63e-10!41;UBERON:0001049!3.05e-10!57;UBERON:0005068!3.05e-10!57;UBERON:0006241!3.05e-10!57;UBERON:0007135!3.05e-10!57;UBERON:0002791!3.31e-10!33;UBERON:0003056!6.02e-10!61;UBERON:0000073!7.99e-10!94;UBERON:0001016!7.99e-10!94;UBERON:0003102!1.03e-09!95;UBERON:0002616!1.12e-09!59;UBERON:0007023!3.20e-09!115;UBERON:0002619!5.30e-09!22;UBERON:0002097!5.81e-09!40;UBERON:0000955!8.37e-09!69;UBERON:0006238!8.37e-09!69;UBERON:0002199!8.60e-09!45;UBERON:0002416!8.60e-09!45;UBERON:0005743!1.89e-08!86;UBERON:0001950!2.87e-08!20;UBERON:0001017!3.18e-08!82;UBERON:0000956!4.37e-08!25;UBERON:0000203!4.37e-08!25;UBERON:0000914!6.18e-08!83;UBERON:0002329!6.18e-08!83;UBERON:0003077!6.18e-08!83;UBERON:0003059!6.18e-08!83;UBERON:0007282!6.18e-08!83;UBERON:0009618!6.18e-08!83;UBERON:0007285!6.18e-08!83;UBERON:0000480!2.26e-07!626;UBERON:0000467!2.65e-07!625;UBERON:0000119!4.46e-07!312 | |ontology_enrichment_uberon=UBERON:0000475!2.43e-14!365;UBERON:0002346!9.72e-13!90;UBERON:0000924!1.08e-12!173;UBERON:0006601!1.08e-12!173;UBERON:0000153!2.40e-11!129;UBERON:0007811!2.40e-11!129;UBERON:0000033!2.69e-11!123;UBERON:0004121!3.15e-11!169;UBERON:0003075!5.58e-11!86;UBERON:0007284!5.58e-11!86;UBERON:0001869!9.84e-11!32;UBERON:0002020!1.10e-10!34;UBERON:0003528!1.10e-10!34;UBERON:0003080!1.77e-10!42;UBERON:0001893!1.80e-10!34;UBERON:0000468!2.04e-10!659;UBERON:0002780!2.63e-10!41;UBERON:0001890!2.63e-10!41;UBERON:0006240!2.63e-10!41;UBERON:0001049!3.05e-10!57;UBERON:0005068!3.05e-10!57;UBERON:0006241!3.05e-10!57;UBERON:0007135!3.05e-10!57;UBERON:0002791!3.31e-10!33;UBERON:0003056!6.02e-10!61;UBERON:0000073!7.99e-10!94;UBERON:0001016!7.99e-10!94;UBERON:0003102!1.03e-09!95;UBERON:0002616!1.12e-09!59;UBERON:0007023!3.20e-09!115;UBERON:0002619!5.30e-09!22;UBERON:0002097!5.81e-09!40;UBERON:0000955!8.37e-09!69;UBERON:0006238!8.37e-09!69;UBERON:0002199!8.60e-09!45;UBERON:0002416!8.60e-09!45;UBERON:0005743!1.89e-08!86;UBERON:0001950!2.87e-08!20;UBERON:0001017!3.18e-08!82;UBERON:0000956!4.37e-08!25;UBERON:0000203!4.37e-08!25;UBERON:0000914!6.18e-08!83;UBERON:0002329!6.18e-08!83;UBERON:0003077!6.18e-08!83;UBERON:0003059!6.18e-08!83;UBERON:0007282!6.18e-08!83;UBERON:0009618!6.18e-08!83;UBERON:0007285!6.18e-08!83;UBERON:0000480!2.26e-07!626;UBERON:0000467!2.65e-07!625;UBERON:0000119!4.46e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.16e-13;41!UBERON:0003102;4.43e-12;50!UBERON:0002199;3.77e-11;46!UBERON:0002416;3.77e-11;46!UBERON:0002067;2.56e-09;9!UBERON:0001869;7.92e-09;32!UBERON:0003129;1.36e-08;7!UBERON:0002791;2.62e-08;32!UBERON:0001893;4.49e-08;34!UBERON:0003528;7.64e-08;34!UBERON:0002020;7.64e-08;34!UBERON:0001758;1.15e-07;6!UBERON:0003672;1.15e-07;6!UBERON:0002619;1.94e-07;22!UBERON:0002073;3.36e-07;5!UBERON:0002050;9.26e-07;5!UBERON:0005423;9.26e-07;5 | |||
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|short_description=p@chr7:5462650..5462686,- | |short_description=p@chr7:5462650..5462686,- | ||
}} | }} |
Latest revision as of 10:44, 31 July 2015
Short description: | p@chr7:5462650..5462686, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:5462650..5462686, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-26 | 76 |
skin fibroblast | 2.10e-20 | 23 |
fibroblast of periodontium | 9.32e-08 | 6 |
hair follicle cell | 3.53e-07 | 5 |
fibroblast of gingiva | 6.26e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.76e-17 | 41 |
integument | 2.73e-17 | 46 |
integumental system | 2.73e-17 | 46 |
surface structure | 4.11e-15 | 99 |
ectoderm-derived structure | 1.60e-12 | 171 |
ectoderm | 1.60e-12 | 171 |
presumptive ectoderm | 1.60e-12 | 171 |
structure with developmental contribution from neural crest | 2.64e-11 | 132 |
cerebral hemisphere | 4.13e-10 | 32 |
dermis | 2.24e-09 | 9 |
dermatome | 2.24e-09 | 9 |
future dermis | 2.24e-09 | 9 |
brain grey matter | 3.32e-09 | 34 |
gray matter | 3.32e-09 | 34 |
regional part of telencephalon | 3.34e-09 | 32 |
telencephalon | 3.49e-09 | 34 |
skull | 1.08e-08 | 7 |
neurectoderm | 4.25e-08 | 86 |
regional part of cerebral cortex | 9.00e-08 | 22 |
periodontium | 9.32e-08 | 6 |
dentition | 9.32e-08 | 6 |
regional part of forebrain | 2.14e-07 | 41 |
forebrain | 2.14e-07 | 41 |
anterior neural tube | 2.14e-07 | 41 |
future forebrain | 2.14e-07 | 41 |
pre-chordal neural plate | 3.16e-07 | 61 |
hair follicle | 3.53e-07 | 5 |
hair follicle placode | 3.53e-07 | 5 |
ecto-epithelium | 9.04e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.70e-07 | 5 |
myotonic disease | 8.70e-07 | 5 |
muscle tissue disease | 8.70e-07 | 5 |
myopathy | 8.70e-07 | 5 |
muscular disease | 8.70e-07 | 5 |
myotonic dystrophy | 8.70e-07 | 5 |