FFCP PHASE1:Hg19::chr8:11351533..11351546,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=640 | |EntrezGene=640 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1057 | |HGNC=1057 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUW7,P51451,Q05D26,Q96IN1 | |UniProt=E7EUW7,P51451,Q05D26,Q96IN1 | ||
|association_with_transcript=12bp_to_ENST00000427279,NM_001715,uc003wtx.2,uc003wty.2,uc003wtz.2_5end | |association_with_transcript=12bp_to_ENST00000427279,NM_001715,uc003wtx.2,uc003wty.2,uc003wtz.2_5end | ||
|cluster_id=chr8:11351533..11351546,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_7_at_BLK_5end | |description=CAGE_peak_7_at_BLK_5end | ||
|id=chr8:11351533..11351546,+ | |id=chr8:11351533..11351546,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.97e-47!24;CL:0000826!2.97e-47!24;CL:0000236!3.70e-46!14;CL:0000542!5.12e-23!53;CL:0000051!5.12e-23!53;CL:0000838!4.00e-21!52;CL:0002087!2.00e-14!119;CL:0000738!1.94e-13!140;CL:0000817!1.26e-10!3;CL:0000037!2.01e-10!172;CL:0000566!2.01e-10!172;CL:0000784!2.57e-10!3;CL:0000842!4.85e-10!3;CL:0000988!1.90e-09!182;CL:0002031!3.18e-09!124;CL:0000224!1.24e-07!4;CL:0000785!1.56e-07!2;CL:0000955!1.56e-07!2;CL:0000818!1.56e-07!2;CL:0000954!1.56e-07!2;CL:0000816!1.56e-07!2;CL:0002032!5.87e-07!165;CL:0000837!5.87e-07!165 | |ontology_enrichment_celltype=CL:0000945!2.97e-47!24;CL:0000826!2.97e-47!24;CL:0000236!3.70e-46!14;CL:0000542!5.12e-23!53;CL:0000051!5.12e-23!53;CL:0000838!4.00e-21!52;CL:0002087!2.00e-14!119;CL:0000738!1.94e-13!140;CL:0000817!1.26e-10!3;CL:0000037!2.01e-10!172;CL:0000566!2.01e-10!172;CL:0000784!2.57e-10!3;CL:0000842!4.85e-10!3;CL:0000988!1.90e-09!182;CL:0002031!3.18e-09!124;CL:0000224!1.24e-07!4;CL:0000785!1.56e-07!2;CL:0000955!1.56e-07!2;CL:0000818!1.56e-07!2;CL:0000954!1.56e-07!2;CL:0000816!1.56e-07!2;CL:0002032!5.87e-07!165;CL:0000837!5.87e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.51e-84;13!CL:0000945;2.79e-67;24!CL:0000542;3.76e-25;53!CL:0000784;2.12e-09;3!CL:0000817;8.80e-08;1!CL:0000785;1.22e-07;1!CL:0000819;1.22e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.02e-78,14;CL:0000945,2.24e-67,24;CL:0000826,2.24e-67,24;CL:0000542,1.18e-32,53;CL:0000051,1.18e-32,53;CL:0000838,2.29e-29,52;CL:0000738,3.86e-15,136;CL:0002087,9.17e-15,115;CL:0000037,1.65e-11,168;CL:0002031,9.08e-11,120;CL:0000988,1.01e-10,177;CL:0000817,1.64e-09,3;CL:0000784,2.30e-09,3;CL:0002032,2.32e-08,161;CL:0000837,2.32e-08,161;CL:0000819,1.04e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.76e-25;53!UBERON:0004872;7.02e-09;7!UBERON:0001045;8.80e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.78e-10;10!DOID:12603;5.90e-08;1!DOID:0060073;1.22e-07;1!DOID:8675;1.22e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.57e-10,10;DOID:12603,5.70e-08,1;DOID:0060073,1.04e-07,1;DOID:8675,1.04e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.31e-28!15;UBERON:0000179!3.31e-28!15;UBERON:0000463!3.31e-28!15;UBERON:0007023!1.36e-10!115;UBERON:0002193!4.30e-08!112;UBERON:0004177!1.82e-07!7;UBERON:0002390!2.54e-07!102;UBERON:0003061!2.54e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!3.31e-28!15;UBERON:0000179!3.31e-28!15;UBERON:0000463!3.31e-28!15;UBERON:0007023!1.36e-10!115;UBERON:0002193!4.30e-08!112;UBERON:0004177!1.82e-07!7;UBERON:0002390!2.54e-07!102;UBERON:0003061!2.54e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.94e-10;15!UBERON:0000179;2.94e-10;15!UBERON:0000463;2.94e-10;15!UBERON:0002106;1.32e-09;3!UBERON:0002390;2.58e-08;32!UBERON:0002193;2.64e-08;42!UBERON:0000029;6.74e-08;1!UBERON:0002372;8.80e-08;1!UBERON:0001154;8.80e-08;1!UBERON:0001153;8.80e-08;1!UBERON:0009854;8.80e-08;1!UBERON:0001961;8.80e-08;1!UBERON:0001744;8.80e-08;1!UBERON:0001042;8.80e-08;1!UBERON:0001735;8.80e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.03e-10,15;UBERON:0000179,3.03e-10,15;UBERON:0000463,3.03e-10,15;UBERON:0002106,1.38e-09,3;UBERON:0004854,1.38e-09,3;UBERON:0009034,1.38e-09,3;UBERON:0002095,1.38e-09,3;UBERON:0004782,1.38e-09,3;UBERON:0003281,1.38e-09,3;UBERON:0009664,1.38e-09,3;UBERON:0002296,1.38e-09,3;UBERON:0005602,1.38e-09,3;UBERON:0001179,1.38e-09,3;UBERON:0006293,1.38e-09,3;UBERON:0000029,6.52e-08,1;UBERON:0002372,7.97e-08,1;UBERON:0001961,7.97e-08,1;UBERON:0001744,7.97e-08,1;UBERON:0001735,7.97e-08,1;UBERON:0001154,9.72e-08,1;UBERON:0001153,9.72e-08,1;UBERON:0001045,9.72e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0,0,0,0,0,0,0,14.3314321073558,2.84338464974843,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,13.6534652815533,12.4531295540898,8.10787422876364,8.40831572775626,12.6445536789986,6.61044872784862,9.54053754535364,8.53819453664173,7.6340834618222,10.7036503875064,1.32171328579026,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,1.14398982156026,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,2.46817363851717,0.648473311192717,2.70015718619057,1.58625035258854,0,0,0,6.68891430452587,3.75099953738757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,2.91927662745066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,5.95399226174341,0,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,7.51871343838829,2.51385763096951,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.193766729508018,0.248298857183432,0.112131862580613,0.0636471582781649,0,0,0,3.97377112786066,0.215166616178029,0,0,0,0,0,0,0,0,0,3.62292828463847,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0,0,0,0,0,0,0,14.3314321073558,2.84338464974843,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,13.6534652815533,12.4531295540898,8.10787422876364,8.40831572775626,12.6445536789986,6.61044872784862,9.54053754535364,8.53819453664173,7.6340834618222,10.7036503875064,1.32171328579026,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,1.14398982156026,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,2.46817363851717,0.648473311192717,2.70015718619057,1.58625035258854,0,0,0,6.68891430452587,3.75099953738757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,2.91927662745066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,5.95399226174341,0,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,7.51871343838829,2.51385763096951,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.193766729508018,0.248298857183432,0.112131862580613,0.0636471582781649,0,0,0,3.97377112786066,0.215166616178029,0,0,0,0,0,0,0,0,0,3.62292828463847,0.641136984606466 | ||
|short_description=p7@BLK | |short_description=p7@BLK | ||
}} | }} |
Latest revision as of 05:09, 25 September 2015
Short description: | p7@BLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_BLK_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 12bp_to_ENST00000427279, NM_001715, uc003wtx.2, uc003wty.2, uc003wtz.2_5end |
EntrezGene: | BLK |
HGNC: | 1057 |
UniProt: | E7EUW7P51451Q05D26Q96IN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.02e-78 | 14 |
lymphocyte of B lineage | 2.24e-67 | 24 |
pro-B cell | 2.24e-67 | 24 |
lymphocyte | 1.18e-32 | 53 |
common lymphoid progenitor | 1.18e-32 | 53 |
lymphoid lineage restricted progenitor cell | 2.29e-29 | 52 |
leukocyte | 3.86e-15 | 136 |
nongranular leukocyte | 9.17e-15 | 115 |
hematopoietic stem cell | 1.65e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 9.08e-11 | 120 |
hematopoietic cell | 1.01e-10 | 177 |
precursor B cell | 1.64e-09 | 3 |
plasmacytoid dendritic cell | 2.30e-09 | 3 |
hematopoietic oligopotent progenitor cell | 2.32e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.32e-08 | 161 |
B-1 B cell | 1.04e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 3.03e-10 | 15 |
haemolymphatic fluid | 3.03e-10 | 15 |
organism substance | 3.03e-10 | 15 |
spleen | 1.38e-09 | 3 |
gastrointestinal system mesentery | 1.38e-09 | 3 |
stomach region | 1.38e-09 | 3 |
mesentery | 1.38e-09 | 3 |
gastrointestinal system serosa | 1.38e-09 | 3 |
mesentery of stomach | 1.38e-09 | 3 |
gut mesentery | 1.38e-09 | 3 |
dorsal mesentery | 1.38e-09 | 3 |
dorsal mesogastrium | 1.38e-09 | 3 |
peritoneal cavity | 1.38e-09 | 3 |
spleen primordium | 1.38e-09 | 3 |
lymph node | 6.52e-08 | 1 |
tonsil | 7.97e-08 | 1 |
mucosa-associated lymphoid tissue | 7.97e-08 | 1 |
lymphoid tissue | 7.97e-08 | 1 |
tonsillar ring | 7.97e-08 | 1 |
vermiform appendix | 9.72e-08 | 1 |
caecum | 9.72e-08 | 1 |
midgut | 9.72e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.57e-10 | 10 |
acute leukemia | 5.70e-08 | 1 |
lymphatic system cancer | 1.04e-07 | 1 |
lymphosarcoma | 1.04e-07 | 1 |