FFCP PHASE1:Hg19::chr3:53079281..53079340,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51460 | |EntrezGene=51460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20255 | |HGNC=20255 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHJ3,Q402F7 | |UniProt=Q9UHJ3,Q402F7 | ||
|association_with_transcript=0bp_to_ENST00000394750,ENST00000470575,NM_001005159,uc003dgf.2_5end | |association_with_transcript=0bp_to_ENST00000394750,ENST00000470575,NM_001005159,uc003dgf.2_5end | ||
|cluster_id=chr3:53079281..53079340,- | |||
|description=CAGE_peak_3_at_SFMBT1_5end | |description=CAGE_peak_3_at_SFMBT1_5end | ||
|id=chr3:53079281..53079340,- | |id=chr3:53079281..53079340,- | ||
|ontology_enrichment_celltype=CL:0000791!3.14e-10!18;CL:0000789!3.14e-10!18;CL:0002420!3.14e-10!18;CL:0002419!3.14e-10!18;CL:0000790!3.14e-10!18;CL:0000542!1.97e-09!53;CL:0000051!1.97e-09!53;CL:0000838!2.67e-09!52;CL:0000084!2.38e-07!25;CL:0000827!2.38e-07!25 | |ontology_enrichment_celltype=CL:0000791!3.14e-10!18;CL:0000789!3.14e-10!18;CL:0002420!3.14e-10!18;CL:0002419!3.14e-10!18;CL:0000790!3.14e-10!18;CL:0000542!1.97e-09!53;CL:0000051!1.97e-09!53;CL:0000838!2.67e-09!52;CL:0000084!2.38e-07!25;CL:0000827!2.38e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.38e-19;18!CL:0000789;5.38e-19;18!CL:0002419;5.38e-19;18!CL:0000084;1.21e-13;25!CL:0000236;6.60e-13;13!CL:0000625;1.29e-12;11!CL:0000542;3.98e-12;53!CL:0000624;1.53e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.68e-20,52;CL:0000791,2.71e-19,18;CL:0000789,2.71e-19,18;CL:0002420,2.71e-19,18;CL:0002419,2.71e-19,18;CL:0000790,2.71e-19,18;CL:0000542,3.29e-19,53;CL:0000051,3.29e-19,53;CL:0000084,9.13e-14,25;CL:0000827,9.13e-14,25;CL:0000625,6.77e-13,11;CL:0000236,1.22e-11,14;CL:0000624,1.45e-09,6;CL:0000738,1.91e-08,136;CL:0002087,2.38e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000790;5.38e-19;18!CL:0000051;3.98e-12;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.21e-28!115;UBERON:0001049!1.69e-09!57;UBERON:0005068!1.69e-09!57;UBERON:0006241!1.69e-09!57;UBERON:0007135!1.69e-09!57;UBERON:0001017!2.16e-07!82;UBERON:0003080!2.41e-07!42;UBERON:0002780!3.75e-07!41;UBERON:0001890!3.75e-07!41;UBERON:0006240!3.75e-07!41;UBERON:0000955!3.84e-07!69;UBERON:0006238!3.84e-07!69;UBERON:0002616!4.46e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!4.21e-28!115;UBERON:0001049!1.69e-09!57;UBERON:0005068!1.69e-09!57;UBERON:0006241!1.69e-09!57;UBERON:0007135!1.69e-09!57;UBERON:0001017!2.16e-07!82;UBERON:0003080!2.41e-07!42;UBERON:0002780!3.75e-07!41;UBERON:0001890!3.75e-07!41;UBERON:0006240!3.75e-07!41;UBERON:0000955!3.84e-07!69;UBERON:0006238!3.84e-07!69;UBERON:0002616!4.46e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.73e-07;15!UBERON:0000179;2.73e-07;15!UBERON:0000463;2.73e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.27e-19,114;UBERON:0000178,3.45e-07,15;UBERON:0000179,3.45e-07,15;UBERON:0000463,3.45e-07,15 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.563817616383885,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.251085279189606,0.305653622991805,0.0821005894499457,0.0787107813136792,1.18009283054671,1.15148819429164,0.619264493264304,0,0.30120591877825,0,0,0,0,1.66198622559563,1.20326668482085,0.434021741431704,1.11957737119962,0.32389366601898,0.77272670290256,0.436194716338694,0,0.727752183563449,0.464858073811369,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.425208599930087,0.419317291016752,0.22465726229299,0.901061357049038,0.964353520182481,0.285012743741249,0.19891667719909,0.182664153764634,5.27988733383968,6.00752472388345,6.22656477704488,2.13365111283254,8.00791974072025,5.74752439954483,4.62731410949403,9.54053754535364,3.41527781465669,2.34894875748376,2.6759125968766,0,0.560508562981536,0,5.70458333330116,6.6811829667358,5.34563897398724,2.67498392625085,2.60737813306872,3.31413464014313,3.89653456815823,2.1167986808183,5.89211814949674,1.77227115666897,3.5204502289452,4.99556146930133,5.33243324995501,3.28875809207352,3.59255023121603,0.579606171470105,4.59688345802387,6.95606153033254,9.40819714244791,2.49280553934646,4.59864592322305,3.4362744548263,3.54227568827304,7.32700452945422,3.90650072313851,1.90090408889675,3.46322773878877,6.01537072425766,0,5.91943130110042,6.56902397536837,3.83052812126992,2.40696176205157,6.37227377084316,0,0,0.511450247374121,0.361439152384566,0.50133791063589,0.434539556882471,0.795285947051099,0,0,0.221729397462564,0.175669571386252,8.05521314310933,0,0.370784442784429,0.97364218096405,0.348259474598534,1.19662164466979,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.619954687054593,2.37600571456411,0.989067717114227,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,1.35214253015937,0,0,0,0.211931901159562,0,0.309157587715317,0.772921620136887,0.18611685633159,0.337552664482532,0.389748020644795,0.252433774244115,0.184099797284599,0.323292113637624,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0.243947412259191,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.77236972004421,0,0.983907508344908,0.171567810298526,0,0,0.301586917234893,0.185176890317059,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0.335964256397719,0.141775097242386,1.07470227243418,0.290633938513962,0.766765358330422,0.492663237895943,0.176096868026452,0.621984346622316,1.44119953416961,0.25248486685276,0.253991577168676,0.381988425558278,0,0,0.514137463516618,0,0.571652865261156,0.112131084345361,0.87192013766656,0.1466765716419,0.129271715757778,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.336255431980582,1.57624608161542,4.9594342217689,3.7219480521127,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.623912584592421,0.356857977594324,1.73472656537328,0.819989904948992,0,0,0,0,0,0.173767228936166,0,1.02943027143257,2.68798433959754,1.50999940573032,3.30855429190677,0,0,0,0.496215615637554,0.767309866440312,0.280660094433074,0.512556597022804,1.02341449813341,0.160853921143607,1.48418066444991,0,0.177561725313127,0,0,0,0.604297247958111,0.200506470303285,0.276242966807689,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,0.219259876645935,0,0,0,0,1.64865618636356,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.170453254832202,0.445160178233687,0,0.384380134730212,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.235624804691373,0,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0.354761064070598,1.05553817648832,1.31717957183961,0,0,0,0,0,1.03558180854457,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,2.38231775457789,2.87953591160336,0,3.24018862342869,2.37937552888281,0,0,0,0.557409525377156,0,0.284567373393656,0.478278818186467,0,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0.403599414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|phase1_expression=0.54503513781167,0.428201047781966,0.563817616383885,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.251085279189606,0.305653622991805,0.0821005894499457,0.0787107813136792,1.18009283054671,1.15148819429164,0.619264493264304,0,0.30120591877825,0,0,0,0,1.66198622559563,1.20326668482085,0.434021741431704,1.11957737119962,0.32389366601898,0.77272670290256,0.436194716338694,0,0.727752183563449,0.464858073811369,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.425208599930087,0.419317291016752,0.22465726229299,0.901061357049038,0.964353520182481,0.285012743741249,0.19891667719909,0.182664153764634,5.27988733383968,6.00752472388345,6.22656477704488,2.13365111283254,8.00791974072025,5.74752439954483,4.62731410949403,9.54053754535364,3.41527781465669,2.34894875748376,2.6759125968766,0,0.560508562981536,0,5.70458333330116,6.6811829667358,5.34563897398724,2.67498392625085,2.60737813306872,3.31413464014313,3.89653456815823,2.1167986808183,5.89211814949674,1.77227115666897,3.5204502289452,4.99556146930133,5.33243324995501,3.28875809207352,3.59255023121603,0.579606171470105,4.59688345802387,6.95606153033254,9.40819714244791,2.49280553934646,4.59864592322305,3.4362744548263,3.54227568827304,7.32700452945422,3.90650072313851,1.90090408889675,3.46322773878877,6.01537072425766,0,5.91943130110042,6.56902397536837,3.83052812126992,2.40696176205157,6.37227377084316,0,0,0.511450247374121,0.361439152384566,0.50133791063589,0.434539556882471,0.795285947051099,0,0,0.221729397462564,0.175669571386252,8.05521314310933,0,0.370784442784429,0.97364218096405,0.348259474598534,1.19662164466979,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.619954687054593,2.37600571456411,0.989067717114227,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,1.35214253015937,0,0,0,0.211931901159562,0,0.309157587715317,0.772921620136887,0.18611685633159,0.337552664482532,0.389748020644795,0.252433774244115,0.184099797284599,0.323292113637624,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0.243947412259191,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,1.26755034821831,0,1.77236972004421,0,0.983907508344908,0.171567810298526,0,0,0.301586917234893,0.185176890317059,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0.335964256397719,0.141775097242386,1.07470227243418,0.290633938513962,0.766765358330422,0.492663237895943,0.176096868026452,0.621984346622316,1.44119953416961,0.25248486685276,0.253991577168676,0.381988425558278,0,0,0.514137463516618,0,0.571652865261156,0.112131084345361,0.87192013766656,0.1466765716419,0.129271715757778,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.336255431980582,1.57624608161542,4.9594342217689,3.7219480521127,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.623912584592421,0.356857977594324,1.73472656537328,0.819989904948992,0,0,0,0,0,0.173767228936166,0,1.02943027143257,2.68798433959754,1.50999940573032,3.30855429190677,0,0,0,0.496215615637554,0.767309866440312,0.280660094433074,0.512556597022804,1.02341449813341,0.160853921143607,1.48418066444991,0,0.177561725313127,0,0,0,0.604297247958111,0.200506470303285,0.276242966807689,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,0.219259876645935,0,0,0,0,1.64865618636356,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.170453254832202,0.445160178233687,0,0.384380134730212,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.235624804691373,0,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0.354761064070598,1.05553817648832,1.31717957183961,0,0,0,0,0,1.03558180854457,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,2.38231775457789,2.87953591160336,0,3.24018862342869,2.37937552888281,0,0,0,0.557409525377156,0,0.284567373393656,0.478278818186467,0,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0.403599414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| ||
|short_description=p3@SFMBT1 | |short_description=p3@SFMBT1 | ||
}} | }} |
Latest revision as of 01:20, 19 September 2015
Short description: | p3@SFMBT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SFMBT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394750, ENST00000470575, NM_001005159, uc003dgf.2_5end |
EntrezGene: | SFMBT1 |
HGNC: | 20255 |
UniProt: | Q9UHJ3Q402F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.68e-20 | 52 |
mature alpha-beta T cell | 2.71e-19 | 18 |
alpha-beta T cell | 2.71e-19 | 18 |
immature T cell | 2.71e-19 | 18 |
mature T cell | 2.71e-19 | 18 |
immature alpha-beta T cell | 2.71e-19 | 18 |
lymphocyte | 3.29e-19 | 53 |
common lymphoid progenitor | 3.29e-19 | 53 |
T cell | 9.13e-14 | 25 |
pro-T cell | 9.13e-14 | 25 |
CD8-positive, alpha-beta T cell | 6.77e-13 | 11 |
B cell | 1.22e-11 | 14 |
CD4-positive, alpha-beta T cell | 1.45e-09 | 6 |
leukocyte | 1.91e-08 | 136 |
nongranular leukocyte | 2.38e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.27e-19 | 114 |
blood | 3.45e-07 | 15 |
haemolymphatic fluid | 3.45e-07 | 15 |
organism substance | 3.45e-07 | 15 |