FFCP PHASE1:Hg19::chr4:120549895..120549908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt=O76074 | |UniProt=O76074 | ||
|association_with_transcript=72bp_to_NM_001083,uc003idh.2_5end | |association_with_transcript=72bp_to_NM_001083,uc003idh.2_5end | ||
|cluster_id=chr4:120549895..120549908,- | |||
|coexpression_cluster_id=C1933 | |||
|description=CAGE_peak_12_at_PDE5A_5end | |description=CAGE_peak_12_at_PDE5A_5end | ||
|id=chr4:120549895..120549908,- | |id=chr4:120549895..120549908,- | ||
|ontology_enrichment_celltype=CL:0000055!9.68e-08!180 | |ontology_enrichment_celltype=CL:0000055!9.68e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002622;1.57e-12;3!CL:0002504;2.86e-12;3!CL:1000279;2.86e-12;3!CL:1000280;2.86e-12;3!CL:1000487;8.66e-09;2!CL:0002195;7.59e-08;2!CL:0002571;7.59e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.74e-12,3;CL:0002504,2.63e-12,3;CL:1000279,2.63e-12,3;CL:1000280,2.63e-12,3;CL:1000487,8.55e-09,2;CL:0002195,5.74e-08,2;CL:0002571,5.74e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;5.09e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.83e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.57e-09!155;UBERON:0001555!1.57e-09!155;UBERON:0007026!1.57e-09!155;UBERON:0004119!1.20e-08!169;UBERON:0000925!1.20e-08!169;UBERON:0006595!1.20e-08!169;UBERON:0003101!1.57e-08!22;UBERON:0000079!1.57e-08!22;UBERON:0004122!2.59e-08!15;UBERON:0002367!1.01e-07!11;UBERON:0010147!1.01e-07!11;UBERON:0009846!1.01e-07!11;UBERON:0003353!1.01e-07!11;UBERON:0004902!1.01e-07!11;UBERON:0003820!1.01e-07!11;UBERON:0009847!1.01e-07!11;UBERON:0000162!1.63e-07!14;UBERON:0001353!1.63e-07!14;UBERON:0000163!1.63e-07!14;UBERON:0006866!1.63e-07!14;UBERON:0000164!1.63e-07!14;UBERON:0000931!1.63e-07!14;UBERON:0005156!2.10e-07!59;UBERON:0000990!2.10e-07!59;UBERON:0004921!8.60e-07!129;UBERON:0004185!8.60e-07!129;UBERON:0003937!8.62e-07!12;UBERON:0005399!8.62e-07!12 | |ontology_enrichment_uberon=UBERON:0001007!1.57e-09!155;UBERON:0001555!1.57e-09!155;UBERON:0007026!1.57e-09!155;UBERON:0004119!1.20e-08!169;UBERON:0000925!1.20e-08!169;UBERON:0006595!1.20e-08!169;UBERON:0003101!1.57e-08!22;UBERON:0000079!1.57e-08!22;UBERON:0004122!2.59e-08!15;UBERON:0002367!1.01e-07!11;UBERON:0010147!1.01e-07!11;UBERON:0009846!1.01e-07!11;UBERON:0003353!1.01e-07!11;UBERON:0004902!1.01e-07!11;UBERON:0003820!1.01e-07!11;UBERON:0009847!1.01e-07!11;UBERON:0000162!1.63e-07!14;UBERON:0001353!1.63e-07!14;UBERON:0000163!1.63e-07!14;UBERON:0006866!1.63e-07!14;UBERON:0000164!1.63e-07!14;UBERON:0000931!1.63e-07!14;UBERON:0005156!2.10e-07!59;UBERON:0000990!2.10e-07!59;UBERON:0004921!8.60e-07!129;UBERON:0004185!8.60e-07!129;UBERON:0003937!8.62e-07!12;UBERON:0005399!8.62e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;1.08e-08;11!UBERON:0010147;1.08e-08;11!UBERON:0003937;6.21e-08;12!UBERON:0005399;6.21e-08;12!UBERON:0011135;6.42e-07;5!UBERON:0002216;6.42e-07;5!UBERON:0011134;6.42e-07;5!UBERON:0002209;6.42e-07;5!UBERON:0002213;6.42e-07;5!UBERON:0007844;6.42e-07;5!UBERON:0011138;6.42e-07;5!UBERON:0001130;6.42e-07;5!UBERON:0001066;6.42e-07;5!UBERON:0001468;6.42e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,1.12e-08,11;UBERON:0010147,1.12e-08,11;UBERON:0009846,1.12e-08,11;UBERON:0003353,1.12e-08,11;UBERON:0004902,1.12e-08,11;UBERON:0003820,1.12e-08,11;UBERON:0009847,1.12e-08,11;UBERON:0004122,1.16e-08,15;UBERON:0003937,6.43e-08,12;UBERON:0005399,6.43e-08,12;UBERON:0001007,1.56e-07,145;UBERON:0001555,1.56e-07,145;UBERON:0007026,1.56e-07,145;UBERON:0011135,6.24e-07,5;UBERON:0002216,6.24e-07,5;UBERON:0011134,6.24e-07,5;UBERON:0002209,6.24e-07,5;UBERON:0002213,6.24e-07,5;UBERON:0005856,6.24e-07,5;UBERON:0005866,6.24e-07,5;UBERON:0005863,6.24e-07,5;UBERON:0007844,6.24e-07,5;UBERON:0011138,6.24e-07,5;UBERON:0001130,6.24e-07,5;UBERON:0001066,6.24e-07,5;UBERON:0001468,6.24e-07,5;UBERON:0000162,9.97e-07,14;UBERON:0001353,9.97e-07,14;UBERON:0000163,9.97e-07,14;UBERON:0006866,9.97e-07,14;UBERON:0000164,9.97e-07,14;UBERON:0000931,9.97e-07,14 | |||
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| ||
|short_description=p12@PDE5A | |short_description=p12@PDE5A | ||
}} | }} |
Latest revision as of 23:04, 24 September 2015
Short description: | p12@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PDE5A_5end |
Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
Association with transcript: | 72bp_to_NM_001083, uc003idh.2_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | O76074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.74e-12 | 3 |
enteric smooth muscle cell | 2.63e-12 | 3 |
smooth muscle cell of large intestine | 2.63e-12 | 3 |
smooth muscle cell of colon | 2.63e-12 | 3 |
smooth muscle cell of prostate | 8.55e-09 | 2 |
hepatic stem cell | 5.74e-08 | 2 |
hepatic mesenchymal stem cell | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 1.12e-08 | 11 |
male accessory sex gland | 1.12e-08 | 11 |
embryonic cloacal epithelium | 1.12e-08 | 11 |
epithelium of hindgut | 1.12e-08 | 11 |
urogenital sinus epithelium | 1.12e-08 | 11 |
prostate bud | 1.12e-08 | 11 |
prostate field | 1.12e-08 | 11 |
genitourinary system | 1.16e-08 | 15 |
sex gland | 6.43e-08 | 12 |
male reproductive gland | 6.43e-08 | 12 |
digestive system | 1.56e-07 | 145 |
digestive tract | 1.56e-07 | 145 |
primitive gut | 1.56e-07 | 145 |
intervertebral cartilage | 6.24e-07 | 5 |
symphysis | 6.24e-07 | 5 |
nonsynovial joint | 6.24e-07 | 5 |
fibrous joint | 6.24e-07 | 5 |
cartilaginous joint | 6.24e-07 | 5 |
developing mesenchymal condensation | 6.24e-07 | 5 |
pre-cartilage condensation | 6.24e-07 | 5 |
cartilaginous condensation | 6.24e-07 | 5 |
cartilage element | 6.24e-07 | 5 |
post-cranial axial skeletal system | 6.24e-07 | 5 |
vertebral column | 6.24e-07 | 5 |
intervertebral disk | 6.24e-07 | 5 |
intervertebral joint | 6.24e-07 | 5 |
cloaca | 9.97e-07 | 14 |
anal region | 9.97e-07 | 14 |
embryonic cloaca | 9.97e-07 | 14 |
terminal part of digestive tract | 9.97e-07 | 14 |
primitive urogenital sinus | 9.97e-07 | 14 |
proctodeum | 9.97e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.83e-09 | 2 |