FFCP PHASE1:Hg19::chr9:12698499..12698524,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000381142_5end | |association_with_transcript=0bp_to_ENST00000381142_5end | ||
|cluster_id=chr9:12698499..12698524,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_9_at_TYRP1_5end | |description=CAGE_peak_9_at_TYRP1_5end | ||
|id=chr9:12698499..12698524,+ | |id=chr9:12698499..12698524,+ | ||
|ontology_enrichment_celltype=CL:0000148!4.94e-13!10;CL:0000541!4.94e-13!10;CL:0000147!2.26e-11!14;CL:0000077!2.40e-09!19;CL:0002567!3.71e-09!3;CL:0000174!2.09e-08!3 | |ontology_enrichment_celltype=CL:0000148!4.94e-13!10;CL:0000541!4.94e-13!10;CL:0000147!2.26e-11!14;CL:0000077!2.40e-09!19;CL:0002567!3.71e-09!3;CL:0000174!2.09e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.26e-40;10!CL:0000147;2.50e-28;14!CL:0002567;1.78e-25;3!CL:0000710;1.31e-19;20!CL:0000075;2.52e-14;27!CL:0000077;1.94e-10;19!CL:0002077;5.22e-10;34!CL:0002566;1.43e-09;1!CL:0002568;1.43e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.64e-40,10;CL:0000541,6.64e-40,10;CL:0000147,2.61e-28,14;CL:0002567,2.01e-25,3;CL:0000710,1.35e-19,20;CL:0000075,2.57e-14,27;CL:0000333,3.32e-11,41;CL:0002077,3.34e-11,34;CL:0000077,1.83e-10,19;CL:0002568,1.32e-09,1;CL:0002566,1.43e-09,1;CL:0000133,1.41e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.77e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1909;7.91e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.51e-17,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002119;1.00e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,1.04e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71481048629521,5.34783795781589,15.2382681373061,10.2643467613623,15.9382613690151,18.6212695863229,20.2936767167711,0,0,0,5.94649892485778,0,0,0.26593811658487,0,0,0,0,1.14382394926518,0,0,0,0.355391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.353024506766001,1.58186518546373,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,1.73396969981747,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30585947776478,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,1.81978941049977,3.71104933608458,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11507737014592,1.79921244865442,0.776314784381297,0,0.265841714557995,0,0.450772826991655,0,0.406870733204662,0.545545977607678,1.71856891267982,0,0,0,0,0,0,0.770479321629213,3.21662387062389,0.260994291965212,1.81364740409818,3.93588206350518,0.489473409012935,0,0,9.86778223104182,0,0.192914038270915,0,0,0,2.12701969324168,0,0.779441235357554,0,0.163565394255844,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,0,0,0,1.50100742770978,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71481048629521,5.34783795781589,15.2382681373061,10.2643467613623,15.9382613690151,18.6212695863229,20.2936767167711,0,0,0,5.94649892485778,0,0,0.26593811658487,0,0,0,0,1.14382394926518,0,0,0,0.355391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.353024506766001,1.58186518546373,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,1.73396969981747,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30585947776478,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,1.81978941049977,3.71104933608458,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11507737014592,1.79921244865442,0.776314784381297,0,0.265841714557995,0,0.450772826991655,0,0.406870733204662,0.545545977607678,1.71856891267982,0,0,0,0,0,0,0.770479321629213,3.21662387062389,0.260994291965212,1.81364740409818,3.93588206350518,0.489473409012935,0,0,9.86778223104182,0,0.192914038270915,0,0,0,2.12701969324168,0,0.779441235357554,0,0.163565394255844,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,0,0,0,1.50100742770978,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@TYRP1 | |short_description=p9@TYRP1 | ||
}} | }} |
Latest revision as of 23:47, 24 September 2015
Short description: | p9@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000381142_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.64e-40 | 10 |
melanoblast | 6.64e-40 | 10 |
pigment cell | 2.61e-28 | 14 |
light melanocyte | 2.01e-25 | 3 |
neurecto-epithelial cell | 1.35e-19 | 20 |
columnar/cuboidal epithelial cell | 2.57e-14 | 27 |
migratory neural crest cell | 3.32e-11 | 41 |
ecto-epithelial cell | 3.34e-11 | 34 |
mesothelial cell | 1.83e-10 | 19 |
mesenchymal stem cell of Wharton's jelly | 1.32e-09 | 1 |
dark melanocyte | 1.43e-09 | 1 |
neurectodermal cell | 1.41e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
left ovary | 1.04e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.51e-17 | 2 |