FFCP PHASE1:Hg19::chr4:71587669..71587752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22902 | |EntrezGene=22902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30285 | |HGNC=30285 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L099 | |UniProt=Q7L099 | ||
|association_with_transcript=0bp_to_ENST00000226328,ENST00000381006,NM_001037442,NM_014961,uc003hfq.2,uc003hfr.2,uc011cax.1_5end | |association_with_transcript=0bp_to_ENST00000226328,ENST00000381006,NM_001037442,NM_014961,uc003hfq.2,uc003hfr.2,uc011cax.1_5end | ||
|cluster_id=chr4:71587669..71587752,+ | |||
|coexpression_cluster_id=C503 | |||
|description=CAGE_peak_1_at_RUFY3_5end | |description=CAGE_peak_1_at_RUFY3_5end | ||
|id=chr4:71587669..71587752,+ | |id=chr4:71587669..71587752,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.61e-18!180;CL:0000057!2.08e-08!75;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0000133!6.26e-07!59;CL:0000187!6.42e-07!54;CL:0000393!8.15e-07!60;CL:0000211!8.15e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.61e-18!180;CL:0000057!2.08e-08!75;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0000133!6.26e-07!59;CL:0000187!6.42e-07!54;CL:0000393!8.15e-07!60;CL:0000211!8.15e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.30e-09,76;CL:0000680,4.72e-08,58;CL:0000056,4.72e-08,58;CL:0000355,4.72e-08,58;CL:0000187,1.69e-07,55;CL:0000393,1.93e-07,61;CL:0000211,1.93e-07,61;CL:0000133,6.41e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.26e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.65e-40!94;UBERON:0001016!1.65e-40!94;UBERON:0005743!1.62e-37!86;UBERON:0001017!1.47e-36!82;UBERON:0000955!6.17e-34!69;UBERON:0006238!6.17e-34!69;UBERON:0001049!5.02e-33!57;UBERON:0005068!5.02e-33!57;UBERON:0006241!5.02e-33!57;UBERON:0007135!5.02e-33!57;UBERON:0002346!8.64e-33!90;UBERON:0003075!2.29e-32!86;UBERON:0007284!2.29e-32!86;UBERON:0002616!9.03e-32!59;UBERON:0000924!4.78e-31!173;UBERON:0006601!4.78e-31!173;UBERON:0004121!2.43e-30!169;UBERON:0007023!5.87e-27!115;UBERON:0000033!6.08e-27!123;UBERON:0003080!9.56e-26!42;UBERON:0002780!1.24e-25!41;UBERON:0001890!1.24e-25!41;UBERON:0006240!1.24e-25!41;UBERON:0000153!1.27e-25!129;UBERON:0007811!1.27e-25!129;UBERON:0003056!4.48e-25!61;UBERON:0000475!6.26e-25!365;UBERON:0002020!3.85e-21!34;UBERON:0003528!3.85e-21!34;UBERON:0001893!5.41e-21!34;UBERON:0002791!2.06e-20!33;UBERON:0001869!7.22e-20!32;UBERON:0000956!1.22e-15!25;UBERON:0000203!1.22e-15!25;UBERON:0002619!2.09e-15!22;UBERON:0000119!1.04e-14!312;UBERON:0000483!1.07e-14!309;UBERON:0001950!3.84e-14!20;UBERON:0000468!9.82e-14!659;UBERON:0000481!1.44e-13!347;UBERON:0000025!4.09e-12!194;UBERON:0004111!6.92e-11!241;UBERON:0000467!1.88e-10!625;UBERON:0000480!3.29e-10!626;UBERON:0000477!2.23e-09!286;UBERON:0000914!7.18e-09!83;UBERON:0002329!7.18e-09!83;UBERON:0003077!7.18e-09!83;UBERON:0003059!7.18e-09!83;UBERON:0007282!7.18e-09!83;UBERON:0009618!7.18e-09!83;UBERON:0007285!7.18e-09!83;UBERON:0002385!1.30e-08!63;UBERON:0001015!1.30e-08!63;UBERON:0000383!1.30e-08!63;UBERON:0000922!1.31e-08!612;UBERON:0004290!1.62e-08!70;UBERON:0003076!2.16e-08!15;UBERON:0003057!2.16e-08!15;UBERON:0002050!2.28e-08!605;UBERON:0005423!2.28e-08!605;UBERON:0001134!3.18e-08!61;UBERON:0002036!3.18e-08!61;UBERON:0003082!3.18e-08!61;UBERON:0000923!4.29e-08!604;UBERON:0005291!4.29e-08!604;UBERON:0006598!4.29e-08!604;UBERON:0002532!4.29e-08!604;UBERON:0000064!1.13e-07!219;UBERON:0000062!3.54e-07!511;UBERON:0004732!3.55e-07!13;UBERON:0002420!5.50e-07!9;UBERON:0007245!5.50e-07!9;UBERON:0010009!5.50e-07!9;UBERON:0010011!5.50e-07!9;UBERON:0000454!5.50e-07!9;UBERON:0002308!5.73e-07!9;UBERON:0000125!5.73e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!1.65e-40!94;UBERON:0001016!1.65e-40!94;UBERON:0005743!1.62e-37!86;UBERON:0001017!1.47e-36!82;UBERON:0000955!6.17e-34!69;UBERON:0006238!6.17e-34!69;UBERON:0001049!5.02e-33!57;UBERON:0005068!5.02e-33!57;UBERON:0006241!5.02e-33!57;UBERON:0007135!5.02e-33!57;UBERON:0002346!8.64e-33!90;UBERON:0003075!2.29e-32!86;UBERON:0007284!2.29e-32!86;UBERON:0002616!9.03e-32!59;UBERON:0000924!4.78e-31!173;UBERON:0006601!4.78e-31!173;UBERON:0004121!2.43e-30!169;UBERON:0007023!5.87e-27!115;UBERON:0000033!6.08e-27!123;UBERON:0003080!9.56e-26!42;UBERON:0002780!1.24e-25!41;UBERON:0001890!1.24e-25!41;UBERON:0006240!1.24e-25!41;UBERON:0000153!1.27e-25!129;UBERON:0007811!1.27e-25!129;UBERON:0003056!4.48e-25!61;UBERON:0000475!6.26e-25!365;UBERON:0002020!3.85e-21!34;UBERON:0003528!3.85e-21!34;UBERON:0001893!5.41e-21!34;UBERON:0002791!2.06e-20!33;UBERON:0001869!7.22e-20!32;UBERON:0000956!1.22e-15!25;UBERON:0000203!1.22e-15!25;UBERON:0002619!2.09e-15!22;UBERON:0000119!1.04e-14!312;UBERON:0000483!1.07e-14!309;UBERON:0001950!3.84e-14!20;UBERON:0000468!9.82e-14!659;UBERON:0000481!1.44e-13!347;UBERON:0000025!4.09e-12!194;UBERON:0004111!6.92e-11!241;UBERON:0000467!1.88e-10!625;UBERON:0000480!3.29e-10!626;UBERON:0000477!2.23e-09!286;UBERON:0000914!7.18e-09!83;UBERON:0002329!7.18e-09!83;UBERON:0003077!7.18e-09!83;UBERON:0003059!7.18e-09!83;UBERON:0007282!7.18e-09!83;UBERON:0009618!7.18e-09!83;UBERON:0007285!7.18e-09!83;UBERON:0002385!1.30e-08!63;UBERON:0001015!1.30e-08!63;UBERON:0000383!1.30e-08!63;UBERON:0000922!1.31e-08!612;UBERON:0004290!1.62e-08!70;UBERON:0003076!2.16e-08!15;UBERON:0003057!2.16e-08!15;UBERON:0002050!2.28e-08!605;UBERON:0005423!2.28e-08!605;UBERON:0001134!3.18e-08!61;UBERON:0002036!3.18e-08!61;UBERON:0003082!3.18e-08!61;UBERON:0000923!4.29e-08!604;UBERON:0005291!4.29e-08!604;UBERON:0006598!4.29e-08!604;UBERON:0002532!4.29e-08!604;UBERON:0000064!1.13e-07!219;UBERON:0000062!3.54e-07!511;UBERON:0004732!3.55e-07!13;UBERON:0002420!5.50e-07!9;UBERON:0007245!5.50e-07!9;UBERON:0010009!5.50e-07!9;UBERON:0010011!5.50e-07!9;UBERON:0000454!5.50e-07!9;UBERON:0002308!5.73e-07!9;UBERON:0000125!5.73e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.13e-19;41!UBERON:0001890;2.13e-19;41!UBERON:0003528;4.77e-19;34!UBERON:0002020;4.77e-19;34!UBERON:0001869;6.25e-19;32!UBERON:0002791;6.33e-19;32!UBERON:0001893;6.44e-19;34!UBERON:0000073;1.13e-18;53!UBERON:0002616;1.13e-18;53!UBERON:0000956;2.17e-16;25!UBERON:0000203;2.17e-16;25!UBERON:0001017;2.52e-16;75!UBERON:0002619;3.97e-16;22!UBERON:0000955;1.25e-15;68!UBERON:0001016;2.20e-15;83!UBERON:0001950;8.47e-15;20!UBERON:0007023;1.53e-08;114!UBERON:0011216;3.72e-08;132!UBERON:0004732;1.93e-07;13!UBERON:0002420;2.89e-07;9!UBERON:0007245;2.89e-07;9!UBERON:0010009;2.89e-07;9!UBERON:0010011;2.89e-07;9!UBERON:0000454;2.89e-07;9!UBERON:0000125;3.01e-07;9!UBERON:0002308;3.01e-07;9!UBERON:0002385;4.01e-07;31!UBERON:0001015;4.01e-07;31!UBERON:0000383;4.01e-07;31!UBERON:0010314;5.29e-07;132!UBERON:0004733;9.50e-07;12!UBERON:0002028;9.50e-07;12 | |||
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|phase1_expression=41.0593137151458,15.6293382440418,31.9966497297855,6.00439790118782,13.4088328328186,7.85104671690332,5.06599756336621,8.84407822797563,8.09675447419499,0.982935746006035,0,0,0,7.05468211872266,1.98838425436749,31.5992818832334,27.121253761079,13.1455816269727,18.0535135552488,15.6363743757521,2.65200898617529,13.7920077450359,33.2033745072026,13.4136936571427,12.0520934011011,0,0.0821005894499457,0,0,0,1.08371286321253,0,0,0,0.0774672005803016,0.284338464974843,0,0.553995408531877,1.40381113229099,1.30206522429511,1.34349284543955,3.2389366601898,6.43938919085466,0,0,0,0,0,0,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0,0,0,0,0.199463657621632,0,0.290209238628584,2.8369261234557,1.24564449799115,0,0.521482918420201,0.434377689410233,1.81619850790011,2.94622108790052,0.632924774881769,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,90.2085405361658,6.70700859703636,4.09160197899297,4.3372698286148,7.01873074890245,5.35932120155048,16.7010048880731,4.86634870302636,37.0576483283146,11.9733874629785,13.4387222110483,41.3893878572772,1.09288586487763,1.11235332835329,3.57002133020152,5.57215159357655,1.72845348674525,0.238490624305342,0,0,0.79504962946682,3.4409383804245,1.04142150482278,0.56530794192401,1.25849830862972,0,0,1.8089173141853,6.04802646567407,5.69025041699939,7.25092770796465,9.12326526862215,2.68468263302986,6.61793544622564,0.81014194788176,0.446498641420399,0.673588117878509,0.563057402416611,0,0.949265659568129,0.366403487860815,0,0,0,32.3031768601957,9.87717990983722,91.362334761121,41.3044733878292,12.4133933769425,1.68203280042692,7.47242970107935,1.97334038733728,33.299580787775,2.2900814251847,5.72116660897106,20.7359675873556,18.43762958336,3.51482147750695,13.4228833037038,7.41613368007784,6.72519062483105,5.51942143625695,3.88495066483516,4.9157782345787,19.3946462692149,7.49289335601785,20.6651562351531,28.5120685747693,19.534087413006,4.55080680969013,2.87447256726495,6.39677233025452,3.37820003654303,13.0220134277566,22.8268362858036,22.6800968891275,11.2678544179948,2.94923676216055,10.7633781413317,11.1049842185655,19.7096668078393,15.0045548042201,13.7059863887124,29.3710215652017,24.0090744667751,70.2109542123668,20.9489561096577,16.4081953258674,16.8451314515408,32.0059192501248,39.0510551768276,14.1052937518696,10.6823173155607,0,1.90922284413584,0.573609190778008,0.121973706129595,0.132529768321485,2.44007280025989,7.04895174104519,0.252320850875628,0.36497735907583,14.0804579096834,9.64861407289328,12.4321429217232,27.8620756819187,25.9876613401051,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,5.7620361586396,4.41026134156626,0,0.982827216677626,10.0434284135839,0,0.245976877086227,12.6960179620909,5.37776398502265,0,0.100528972411631,2.12953423864618,4.23550796903422,1.03993478527958,2.88662684050547,37.5614512119249,23.2469214586927,8.51762041790336,3.24089858803628,8.94194515502612,0,0,0.738651018262192,0.234004265139238,0.594524649154913,0,3.35964256397719,0.708875486211932,1.43293636324557,0.871901815541886,0.383382679165211,0,0.616339038092582,0.621984346622316,1.15295962733569,1.13618190083742,22.6052503680122,25.5932245124046,10.5495702489042,8.55362230113526,9.87143929951906,7.80891950394185,32.5842133198859,4.48524337381443,3.92364061949952,4.47363543507795,46.1500025255267,35.7656445851882,5.071816515336,26.8597497750719,14.5610411675913,1.80045161983499,4.25547396069835,1.0656887160644,16.0135352897125,8.68194568626309,8.23240336780769,3.58309802723109,14.5710698984444,3.16780749173372,18.3878020006348,0.871533458600294,4.29883862082845,0,0.502257091432126,0,11.7416179190875,13.7834323000937,14.2636905040718,16.505068960104,18.4928690295345,15.399242838631,0,0,0,0.128343036279748,181.169467070616,175.688802707789,130.685809359431,177.56724125441,322.797008336501,0,0,0,11.2876172381609,9.50323990013386,4.34024037919577,28.076066306659,21.4114786556594,17.1895632386989,33.0338790279451,19.260550382574,11.3703752027992,3.10419213877515,5.31380478828349,2.21243002250044,35.1878638595736,16.0556949119447,6.51972505240626,0,0,0.106727557803444,0,0,0.604780586659361,32.254015016441,77.4982965104715,12.3490441550552,34.0850137020165,28.1438986986687,11.4206284011961,5.93672265779964,3.54682295746108,7.99027763909072,13.5509807422785,20.2509227381612,3.48631135379878,0,0,0.0920809889358963,4.70739237474888,8.01201139229555,16.7839251148063,0.902399225814824,3.31165949548983,0,0,3.37765212457202,0,0.170093705276516,0.215915916102139,0,3.25135725052623,1.50506932156456,0,0.831076008928724,0.223874754722178,0,0,13.3354065060522,11.8085272451894,23.1018660211655,6.69766575710195,16.5740731321202,20.0498084807029,1.72279661398852,1.30012049207304,17.6752322828576,17.4974000108741,16.6372506483816,11.9732866286381,4.13509717453592,60.04791688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| ||
|short_description=p1@RUFY3 | |short_description=p1@RUFY3 | ||
}} | }} |
Latest revision as of 11:10, 18 September 2015
Short description: | p1@RUFY3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RUFY3_5end |
Coexpression cluster: | C503_occipital_spinal_thalamus_locus_optic_globus_pineal |
Association with transcript: | 0bp_to_ENST00000226328, ENST00000381006, NM_001037442, NM_014961, uc003hfq.2, uc003hfr.2, uc011cax.1_5end |
EntrezGene: | RUFY3 |
HGNC: | 30285 |
UniProt: | Q7L099 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.30e-09 | 76 |
muscle precursor cell | 4.72e-08 | 58 |
myoblast | 4.72e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.72e-08 | 58 |
muscle cell | 1.69e-07 | 55 |
electrically responsive cell | 1.93e-07 | 61 |
electrically active cell | 1.93e-07 | 61 |
neurectodermal cell | 6.41e-07 | 59 |