FFCP PHASE1:Hg19::chrM:14222..14232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrM:14222..14232,- | |||
|description=CAGE_peak_at_chrM:14222..14232,- | |description=CAGE_peak_at_chrM:14222..14232,- | ||
|id=chrM:14222..14232,- | |id=chrM:14222..14232,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000306;6.79e-18;4!CL:0002547;6.79e-18;4!CL:0000540;4.30e-12;6!CL:0000404;4.30e-12;6!CL:0002535;1.71e-09;2!CL:0002623;7.28e-07;3!CL:0002564;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,6.79e-18,4;CL:0002547,6.79e-18,4;CL:0000540,4.30e-12,6;CL:0000031,4.30e-12,6;CL:0000404,4.30e-12,6;CL:0002535,2.02e-09,2;CL:0000047,2.66e-09,8;CL:0002623,7.28e-07,3;CL:0002564,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.22e-17;1!CL:0000031;4.30e-12;6!UBERON:0003056;9.64e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;6.79e-18;4!UBERON:0000415;6.79e-18;4!UBERON:0007240;6.79e-18;4!UBERON:0005742;6.79e-18;4!UBERON:0005734;6.79e-18;4!UBERON:0004664;6.79e-18;4!UBERON:0004663;6.79e-18;4!UBERON:0000941;1.22e-17;1!UBERON:0001785;1.22e-17;1!UBERON:0002464;1.22e-17;1!UBERON:0004904;1.22e-17;1!UBERON:0001021;1.22e-17;1!UBERON:0003714;1.71e-09;2!UBERON:0005162;1.71e-09;2!UBERON:0000122;1.71e-09;2!UBERON:0006955;1.71e-09;2!UBERON:0004801;1.71e-09;2!UBERON:0002242;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,6.79e-18,4;UBERON:0007240,6.79e-18,4;UBERON:0005742,6.79e-18,4;UBERON:0005734,6.79e-18,4;UBERON:0004664,6.79e-18,4;UBERON:0004663,6.79e-18,4;UBERON:0000941,1.22e-17,1;UBERON:0001785,1.22e-17,1;UBERON:0002464,1.22e-17,1;UBERON:0004904,1.22e-17,1;UBERON:0001021,1.22e-17,1;UBERON:0003902,1.22e-17,1;UBERON:0005425,1.22e-17,1;UBERON:0004797,1.21e-10,7;UBERON:0003714,1.71e-09,2;UBERON:0005162,1.71e-09,2;UBERON:0000122,1.71e-09,2;UBERON:0006955,2.02e-09,2;UBERON:0004801,2.02e-09,2;UBERON:0002242,9.12e-07,3;UBERON:0003068,9.12e-07,3;UBERON:0002328,9.12e-07,3;UBERON:0004880,9.12e-07,3 | |||
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| ||
|short_description=p@chrM:14222..14232,- | |short_description=p@chrM:14222..14232,- | ||
}} | }} |
Latest revision as of 04:01, 1 August 2015
Short description: | p@chrM:14222..14232, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrM:14222..14232, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 6.79e-18 | 4 |
fibroblast of the aortic adventitia | 6.79e-18 | 4 |
neuron | 4.30e-12 | 6 |
neuroblast | 4.30e-12 | 6 |
electrically signaling cell | 4.30e-12 | 6 |
epithelial cell of cervix | 2.02e-09 | 2 |
neuronal stem cell | 2.66e-09 | 8 |
acinar cell of salivary gland | 7.28e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 6.79e-18 | 4 |
tunica adventitia of artery | 6.79e-18 | 4 |
adventitia | 6.79e-18 | 4 |
tunica adventitia of blood vessel | 6.79e-18 | 4 |
aorta tunica adventitia | 6.79e-18 | 4 |
aorta wall | 6.79e-18 | 4 |
cranial nerve II | 1.22e-17 | 1 |
cranial nerve | 1.22e-17 | 1 |
nerve trunk | 1.22e-17 | 1 |
nerve connecting eye with brain | 1.22e-17 | 1 |
nerve | 1.22e-17 | 1 |
retinal neural layer | 1.22e-17 | 1 |
presumptive neural retina | 1.22e-17 | 1 |
blood vessel layer | 1.21e-10 | 7 |
neural tissue | 1.71e-09 | 2 |
multi cell component structure | 1.71e-09 | 2 |
neuron projection bundle | 1.71e-09 | 2 |
uterine epithelium | 2.02e-09 | 2 |
cervix epithelium | 2.02e-09 | 2 |
nucleus pulposus | 9.12e-07 | 3 |
axial mesoderm | 9.12e-07 | 3 |
notochord | 9.12e-07 | 3 |
chordamesoderm | 9.12e-07 | 3 |