FFCP PHASE1:Hg19::chr5:131826457..131826514,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3659 | |EntrezGene=3659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6116 | |HGNC=6116 | ||
|TSSclassifier=strong | |||
|UniProt=P10914,C9J9C5,Q6FHN8 | |UniProt=P10914,C9J9C5,Q6FHN8 | ||
|association_with_transcript=0bp_to_ENST00000245414,ENST00000437654,ENST00000459982,ENST00000463784,NM_002198,uc003kxa.2,uc003kxd.2_5end | |association_with_transcript=0bp_to_ENST00000245414,ENST00000437654,ENST00000459982,ENST00000463784,NM_002198,uc003kxa.2,uc003kxd.2_5end | ||
|cluster_id=chr5:131826457..131826514,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_IRF1_5end | |description=CAGE_peak_1_at_IRF1_5end | ||
|id=chr5:131826457..131826514,- | |id=chr5:131826457..131826514,- | ||
|ontology_enrichment_celltype=CL:0000738!3.54e-46!140;CL:0000988!4.40e-39!182;CL:0002031!5.43e-38!124;CL:0000037!1.30e-37!172;CL:0000566!1.30e-37!172;CL:0002087!2.00e-36!119;CL:0002032!1.88e-34!165;CL:0000837!1.88e-34!165;CL:0002057!2.56e-24!42;CL:0000766!7.94e-24!76;CL:0000860!1.88e-21!45;CL:0000557!2.01e-20!71;CL:0000839!1.37e-19!70;CL:0002009!2.16e-18!65;CL:0002194!1.56e-17!63;CL:0000576!1.56e-17!63;CL:0000040!1.56e-17!63;CL:0000559!1.56e-17!63;CL:0000763!2.31e-17!112;CL:0000049!2.31e-17!112;CL:0000838!8.03e-17!52;CL:0000542!8.49e-17!53;CL:0000051!8.49e-17!53;CL:0000134!8.82e-15!358;CL:0002320!1.33e-14!365;CL:0000048!7.53e-11!430;CL:0000084!2.35e-10!25;CL:0000827!2.35e-10!25;CL:0000791!7.96e-10!18;CL:0000789!7.96e-10!18;CL:0002420!7.96e-10!18;CL:0002419!7.96e-10!18;CL:0000790!7.96e-10!18;CL:0000723!1.61e-09!436;CL:0000034!7.98e-09!444;CL:0000219!4.21e-08!390 | |ontology_enrichment_celltype=CL:0000738!3.54e-46!140;CL:0000988!4.40e-39!182;CL:0002031!5.43e-38!124;CL:0000037!1.30e-37!172;CL:0000566!1.30e-37!172;CL:0002087!2.00e-36!119;CL:0002032!1.88e-34!165;CL:0000837!1.88e-34!165;CL:0002057!2.56e-24!42;CL:0000766!7.94e-24!76;CL:0000860!1.88e-21!45;CL:0000557!2.01e-20!71;CL:0000839!1.37e-19!70;CL:0002009!2.16e-18!65;CL:0002194!1.56e-17!63;CL:0000576!1.56e-17!63;CL:0000040!1.56e-17!63;CL:0000559!1.56e-17!63;CL:0000763!2.31e-17!112;CL:0000049!2.31e-17!112;CL:0000838!8.03e-17!52;CL:0000542!8.49e-17!53;CL:0000051!8.49e-17!53;CL:0000134!8.82e-15!358;CL:0002320!1.33e-14!365;CL:0000048!7.53e-11!430;CL:0000084!2.35e-10!25;CL:0000827!2.35e-10!25;CL:0000791!7.96e-10!18;CL:0000789!7.96e-10!18;CL:0002420!7.96e-10!18;CL:0002419!7.96e-10!18;CL:0000790!7.96e-10!18;CL:0000723!1.61e-09!436;CL:0000034!7.98e-09!444;CL:0000219!4.21e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-17;33!CL:0002057;1.76e-17;33!CL:0000576;1.37e-14;48!CL:0000473;5.52e-14;39!CL:0000234;5.52e-14;39!CL:0000766;8.25e-13;69!CL:0002087;1.87e-12;104!CL:0000738;1.91e-10;136!CL:0000084;2.36e-10;25!CL:0000542;4.61e-10;53!CL:0000791;7.93e-10;18!CL:0000789;7.93e-10;18!CL:0002419;7.93e-10;18!CL:0000988;2.93e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.20e-49,136;CL:0000988,4.21e-41,177;CL:0002031,8.83e-41,120;CL:0000037,8.37e-40,168;CL:0002087,3.23e-39,115;CL:0002032,1.41e-36,161;CL:0000837,1.41e-36,161;CL:0000766,1.07e-26,72;CL:0000860,2.56e-24,42;CL:0002057,2.56e-24,42;CL:0000557,4.04e-23,67;CL:0000473,4.49e-23,48;CL:0000234,4.49e-23,48;CL:0000839,3.12e-22,66;CL:0002009,4.66e-21,61;CL:0002194,3.62e-20,59;CL:0000576,3.62e-20,59;CL:0000040,3.62e-20,59;CL:0000559,3.62e-20,59;CL:0000763,4.26e-19,108;CL:0000049,4.26e-19,108;CL:0000838,8.03e-17,52;CL:0000542,8.49e-17,53;CL:0000051,8.49e-17,53;CL:0000134,3.31e-15,354;CL:0002320,5.10e-15,361;CL:0000048,2.73e-11,427;CL:0000084,2.35e-10,25;CL:0000827,2.35e-10,25;CL:0000723,6.30e-10,433;CL:0000791,7.96e-10,18;CL:0000789,7.96e-10,18;CL:0002420,7.96e-10,18;CL:0002419,7.96e-10,18;CL:0000790,7.96e-10,18;CL:0000034,3.27e-09,441;CL:0000219,2.21e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-17;42!CL:0000051;4.61e-10;53!CL:0000790;7.93e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.59e-29!112;UBERON:0002390!1.04e-26!102;UBERON:0003061!1.04e-26!102;UBERON:0002405!1.06e-18!115;UBERON:0002371!1.13e-17!80;UBERON:0001474!1.24e-14!86;UBERON:0002384!4.71e-14!375;UBERON:0003081!1.61e-11!216;UBERON:0004765!4.58e-10!101;UBERON:0001434!4.58e-10!101;UBERON:0000178!1.20e-08!15;UBERON:0000179!1.20e-08!15;UBERON:0000463!1.20e-08!15 | |ontology_enrichment_uberon=UBERON:0002193!8.59e-29!112;UBERON:0002390!1.04e-26!102;UBERON:0003061!1.04e-26!102;UBERON:0002405!1.06e-18!115;UBERON:0002371!1.13e-17!80;UBERON:0001474!1.24e-14!86;UBERON:0002384!4.71e-14!375;UBERON:0003081!1.61e-11!216;UBERON:0004765!4.58e-10!101;UBERON:0001434!4.58e-10!101;UBERON:0000178!1.20e-08!15;UBERON:0000179!1.20e-08!15;UBERON:0000463!1.20e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.20e-08;15!UBERON:0000179;1.20e-08;15!UBERON:0000463;1.20e-08;15 | |||
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| ||
|short_description=p1@IRF1 | |short_description=p1@IRF1 | ||
}} | }} |
Latest revision as of 05:21, 20 September 2015
Short description: | p1@IRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRF1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000245414, ENST00000437654, ENST00000459982, ENST00000463784, NM_002198, uc003kxa.2, uc003kxd.2_5end |
EntrezGene: | IRF1 |
HGNC: | 6116 |
UniProt: | P10914C9J9C5Q6FHN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.91e-31 | 108 |
hematopoietic system | 3.25e-29 | 98 |
blood island | 3.25e-29 | 98 |
immune system | 7.33e-24 | 93 |
bone marrow | 6.76e-20 | 76 |
bone element | 1.78e-16 | 82 |
connective tissue | 1.87e-14 | 371 |
skeletal element | 8.99e-14 | 90 |
lateral plate mesoderm | 1.85e-11 | 203 |
skeletal system | 3.10e-11 | 100 |
blood | 1.20e-08 | 15 |
haemolymphatic fluid | 1.20e-08 | 15 |
organism substance | 1.20e-08 | 15 |