FFCP PHASE1:Hg19::chrX:48660565..48660624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10013 | |EntrezGene=10013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14064 | |HGNC=14064 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUZ1,E7EPS2,E9PEH1 | |UniProt=E7EUZ1,E7EPS2,E9PEH1 | ||
|association_with_transcript=0bp_to_ENST00000413163,ENST00000426196,ENST00000441703,ENST00000481929,ENST00000489352,uc004dku.3,uc011mmj.1_5end | |association_with_transcript=0bp_to_ENST00000413163,ENST00000426196,ENST00000441703,ENST00000481929,ENST00000489352,uc004dku.3,uc011mmj.1_5end | ||
|cluster_id=chrX:48660565..48660624,+ | |||
|description=CAGE_peak_2_at_HDAC6_5end | |description=CAGE_peak_2_at_HDAC6_5end | ||
|id=chrX:48660565..48660624,+ | |id=chrX:48660565..48660624,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.05e-24!115;UBERON:0001049!8.00e-20!57;UBERON:0005068!8.00e-20!57;UBERON:0006241!8.00e-20!57;UBERON:0007135!8.00e-20!57;UBERON:0002616!1.87e-16!59;UBERON:0003075!5.14e-15!86;UBERON:0007284!5.14e-15!86;UBERON:0002346!2.26e-14!90;UBERON:0003080!2.40e-14!42;UBERON:0000955!6.35e-14!69;UBERON:0006238!6.35e-14!69;UBERON:0002780!8.36e-14!41;UBERON:0001890!8.36e-14!41;UBERON:0006240!8.36e-14!41;UBERON:0002020!3.06e-11!34;UBERON:0003528!3.06e-11!34;UBERON:0001017!8.51e-11!82;UBERON:0002791!9.49e-11!33;UBERON:0001893!1.23e-10!34;UBERON:0005743!3.56e-10!86;UBERON:0003056!5.32e-10!61;UBERON:0000062!7.93e-10!511;UBERON:0001869!1.50e-09!32;UBERON:0000073!1.05e-08!94;UBERON:0001016!1.05e-08!94;UBERON:0000153!1.99e-08!129;UBERON:0007811!1.99e-08!129;UBERON:0000033!4.85e-08!123;UBERON:0000956!8.92e-08!25;UBERON:0000203!8.92e-08!25;UBERON:0004121!3.18e-07!169;UBERON:0002619!3.21e-07!22;UBERON:0000924!4.60e-07!173;UBERON:0006601!4.60e-07!173;UBERON:0003076!9.07e-07!15;UBERON:0003057!9.07e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!8.05e-24!115;UBERON:0001049!8.00e-20!57;UBERON:0005068!8.00e-20!57;UBERON:0006241!8.00e-20!57;UBERON:0007135!8.00e-20!57;UBERON:0002616!1.87e-16!59;UBERON:0003075!5.14e-15!86;UBERON:0007284!5.14e-15!86;UBERON:0002346!2.26e-14!90;UBERON:0003080!2.40e-14!42;UBERON:0000955!6.35e-14!69;UBERON:0006238!6.35e-14!69;UBERON:0002780!8.36e-14!41;UBERON:0001890!8.36e-14!41;UBERON:0006240!8.36e-14!41;UBERON:0002020!3.06e-11!34;UBERON:0003528!3.06e-11!34;UBERON:0001017!8.51e-11!82;UBERON:0002791!9.49e-11!33;UBERON:0001893!1.23e-10!34;UBERON:0005743!3.56e-10!86;UBERON:0003056!5.32e-10!61;UBERON:0000062!7.93e-10!511;UBERON:0001869!1.50e-09!32;UBERON:0000073!1.05e-08!94;UBERON:0001016!1.05e-08!94;UBERON:0000153!1.99e-08!129;UBERON:0007811!1.99e-08!129;UBERON:0000033!4.85e-08!123;UBERON:0000956!8.92e-08!25;UBERON:0000203!8.92e-08!25;UBERON:0004121!3.18e-07!169;UBERON:0002619!3.21e-07!22;UBERON:0000924!4.60e-07!173;UBERON:0006601!4.60e-07!173;UBERON:0003076!9.07e-07!15;UBERON:0003057!9.07e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.24e-10;53!UBERON:0002616;1.24e-10;53!UBERON:0002780;2.76e-10;41!UBERON:0001890;2.76e-10;41!UBERON:0003528;5.33e-10;34!UBERON:0002020;5.33e-10;34!UBERON:0002791;2.74e-09;32!UBERON:0001893;5.06e-09;34!UBERON:0001869;8.07e-09;32!UBERON:0000956;6.61e-08;25!UBERON:0000203;6.61e-08;25!UBERON:0002619;2.36e-07;22!UBERON:0007023;5.79e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.49e-23,114;UBERON:0001049,2.91e-19,56;UBERON:0005068,2.91e-19,56;UBERON:0006241,2.91e-19,56;UBERON:0007135,2.91e-19,56;UBERON:0000073,1.62e-17,53;UBERON:0002616,1.62e-17,53;UBERON:0003075,1.28e-14,82;UBERON:0007284,1.28e-14,82;UBERON:0002346,5.75e-14,86;UBERON:0002780,8.36e-14,41;UBERON:0001890,8.36e-14,41;UBERON:0003080,8.36e-14,41;UBERON:0006240,8.36e-14,41;UBERON:0000955,1.92e-13,68;UBERON:0006238,1.92e-13,68;UBERON:0010371,1.05e-12,104;UBERON:0003528,3.06e-11,34;UBERON:0002020,3.06e-11,34;UBERON:0001893,1.23e-10,34;UBERON:0001017,2.21e-10,81;UBERON:0002791,3.08e-10,32;UBERON:0003056,4.74e-10,61;UBERON:0001869,1.50e-09,32;UBERON:0010314,4.24e-09,132;UBERON:0001016,7.97e-09,89;UBERON:0000956,8.92e-08,25;UBERON:0000203,8.92e-08,25;UBERON:0002619,3.21e-07,22;UBERON:0003076,9.07e-07,15;UBERON:0003057,9.07e-07,15 | |||
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| ||
|short_description=p2@HDAC6 | |short_description=p2@HDAC6 | ||
}} | }} |
Latest revision as of 19:56, 15 September 2015
Short description: | p2@HDAC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HDAC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413163, ENST00000426196, ENST00000441703, ENST00000481929, ENST00000489352, uc004dku.3, uc011mmj.1_5end |
EntrezGene: | HDAC6 |
HGNC: | 14064 |
UniProt: | E7EUZ1E7EPS2E9PEH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.49e-23 | 114 |
neural tube | 2.91e-19 | 56 |
neural rod | 2.91e-19 | 56 |
future spinal cord | 2.91e-19 | 56 |
neural keel | 2.91e-19 | 56 |
regional part of nervous system | 1.62e-17 | 53 |
regional part of brain | 1.62e-17 | 53 |
neural plate | 1.28e-14 | 82 |
presumptive neural plate | 1.28e-14 | 82 |
neurectoderm | 5.75e-14 | 86 |
regional part of forebrain | 8.36e-14 | 41 |
forebrain | 8.36e-14 | 41 |
anterior neural tube | 8.36e-14 | 41 |
future forebrain | 8.36e-14 | 41 |
brain | 1.92e-13 | 68 |
future brain | 1.92e-13 | 68 |
ecto-epithelium | 1.05e-12 | 104 |
brain grey matter | 3.06e-11 | 34 |
gray matter | 3.06e-11 | 34 |
telencephalon | 1.23e-10 | 34 |
central nervous system | 2.21e-10 | 81 |
regional part of telencephalon | 3.08e-10 | 32 |
pre-chordal neural plate | 4.74e-10 | 61 |
cerebral hemisphere | 1.50e-09 | 32 |
structure with developmental contribution from neural crest | 4.24e-09 | 132 |
nervous system | 7.97e-09 | 89 |
cerebral cortex | 8.92e-08 | 25 |
pallium | 8.92e-08 | 25 |
regional part of cerebral cortex | 3.21e-07 | 22 |
posterior neural tube | 9.07e-07 | 15 |
chordal neural plate | 9.07e-07 | 15 |