FFCP PHASE1:Hg19::chr16:30441293..30441370,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:30441293..30441370,-
|short_description=p1@DCTPP1
|description=CAGE_peak_1_at_DCTPP1_5end
|association_with_transcript=2bp_to_NM_024096,uc002dyf.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79077 | |EntrezGene=79077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28777 | |HGNC=28777 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H773 | |UniProt=Q9H773 | ||
|association_with_transcript=2bp_to_NM_024096,uc002dyf.2_5end | |||
|cluster_id=chr16:30441293..30441370,- | |||
|coexpression_cluster_id=C534 | |||
|description=CAGE_peak_1_at_DCTPP1_5end | |||
|id=chr16:30441293..30441370,- | |||
|ontology_enrichment_celltype=CL:0000066!4.62e-29!254;CL:0002321!1.83e-25!248;CL:0000220!1.29e-24!246;CL:0000012!1.85e-17!682;CL:0000548!2.26e-17!679;CL:0000004!2.26e-17!679;CL:0000255!2.26e-17!679;CL:0000222!2.58e-12!119;CL:0000213!1.36e-10!57;CL:0000215!1.36e-10!57;CL:0000144!1.66e-10!625;CL:0000076!2.02e-09!62;CL:1000449!2.56e-09!16;CL:0002078!3.87e-09!44;CL:0000115!1.53e-08!35;CL:0000221!2.69e-08!71;CL:1000497!4.79e-08!18;CL:0002518!4.79e-08!18;CL:0000003!5.03e-08!722;CL:0002681!9.42e-08!13;CL:0002584!9.42e-08!13;CL:0000071!2.66e-07!18;CL:0002546!2.66e-07!18;CL:0002371!4.42e-07!591;CL:0002139!4.54e-07!24;CL:1000507!6.26e-07!12;CL:1000494!6.26e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.54e-10;15!CL:1000497;9.50e-09;17!CL:0002518;9.50e-09;17!CL:0002681;1.28e-08;12!CL:0002584;1.28e-08;12!CL:0000115;1.03e-07;36!CL:0000071;2.62e-07;18!CL:1000507;2.78e-07;10!CL:1000494;2.78e-07;10!CL:0002139;4.42e-07;24!CL:0000213;6.22e-07;58!CL:0000215;6.22e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.55e-29,253;CL:0002321,1.16e-25,250;CL:0000222,1.92e-12,121;CL:0000213,5.20e-11,58;CL:0000215,5.20e-11,58;CL:1000449,3.40e-10,15;CL:0002078,1.46e-09,45;CL:0000076,5.13e-09,63;CL:0000115,5.60e-09,36;CL:1000497,9.72e-09,17;CL:0002518,9.72e-09,17;CL:0002681,1.24e-08,12;CL:0002584,1.24e-08,12;CL:0000221,5.80e-08,72;CL:0000071,2.66e-07,18;CL:0002546,2.66e-07,18;CL:1000507,2.72e-07,10;CL:1000494,2.72e-07,10;CL:0002139,4.54e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;2.62e-07;18 | |||
|ontology_enrichment_disease=DOID:162!3.23e-12!235;DOID:14566!1.20e-11!239;DOID:2531!4.26e-11!51;DOID:0060083!4.26e-11!51;DOID:1240!2.88e-09!39;DOID:0050686!9.63e-08!137;DOID:8692!3.32e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.58e-08;39!DOID:2531;2.18e-07;51!DOID:0060083;2.18e-07;51!DOID:8692;5.58e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.23e-12,235;DOID:14566,1.20e-11,239;DOID:2531,4.26e-11,51;DOID:0060083,4.26e-11,51;DOID:1240,2.88e-09,39;DOID:0050686,9.63e-08,137;DOID:8692,3.32e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.70e-09!238;UBERON:0009142!1.70e-09!238;UBERON:0004211!2.56e-09!16;UBERON:0001285!2.56e-09!16;UBERON:0007684!2.56e-09!16;UBERON:0003220!2.56e-09!16;UBERON:0004208!2.56e-09!16;UBERON:0003914!6.58e-09!118;UBERON:0006555!3.26e-08!17;UBERON:0005103!3.26e-08!17;UBERON:0000083!3.26e-08!17;UBERON:0009201!3.26e-08!17;UBERON:0004819!3.26e-08!17;UBERON:0006553!3.26e-08!17;UBERON:0003074!3.26e-08!17;UBERON:0003060!3.26e-08!17;UBERON:0000080!7.67e-08!18;UBERON:0002120!7.67e-08!18;UBERON:0004875!7.67e-08!18;UBERON:0005721!7.67e-08!18;UBERON:0005754!7.67e-08!18;UBERON:0007297!7.67e-08!18;UBERON:0001225!9.42e-08!13;UBERON:0008987!9.42e-08!13;UBERON:0000072!1.16e-07!46;UBERON:0000487!1.56e-07!22;UBERON:0002113!1.87e-07!27;UBERON:0003918!1.87e-07!27;UBERON:0005095!1.87e-07!27;UBERON:0007687!1.87e-07!27;UBERON:0003887!2.16e-07!21;UBERON:0001986!2.66e-07!18;UBERON:0004638!2.66e-07!18;UBERON:0004852!2.66e-07!18;UBERON:0000119!2.95e-07!312;UBERON:0005256!3.01e-07!143;UBERON:0000490!3.20e-07!138;UBERON:0006914!3.62e-07!25;UBERON:0002100!4.52e-07!216;UBERON:0009773!6.26e-07!12;UBERON:0001231!6.26e-07!12;UBERON:0004810!6.26e-07!12;UBERON:0000483!8.70e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.54e-10;15!UBERON:0004819;3.54e-10;15!UBERON:0001285;3.54e-10;15!UBERON:0007684;3.54e-10;15!UBERON:0002113;4.78e-09;24!UBERON:0011143;4.78e-09;24!UBERON:0001225;1.28e-08;12!UBERON:0008987;1.28e-08;12!UBERON:0000353;1.47e-08;15!UBERON:0006554;1.77e-08;30!UBERON:0001008;1.77e-08;30!UBERON:0000487;1.54e-07;22!UBERON:0000490;1.70e-07;33!UBERON:0000072;1.78e-07;37!UBERON:0004638;2.62e-07;18!UBERON:0001986;2.62e-07;18!UBERON:0004852;2.62e-07;18!UBERON:0001851;2.73e-07;15!UBERON:0004211;2.78e-07;10!UBERON:0009773;2.78e-07;10!UBERON:0001231;2.78e-07;10!UBERON:0004810;2.78e-07;10!UBERON:0006914;3.73e-07;25!UBERON:0003914;9.78e-07;74 | |||
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| ||
|short_description=p1@DCTPP1 | |||
}} | }} |
Latest revision as of 07:51, 16 September 2015
Short description: | p1@DCTPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCTPP1_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 2bp_to_NM_024096, uc002dyf.2_5end |
EntrezGene: | DCTPP1 |
HGNC: | 28777 |
UniProt: | Q9H773 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.55e-29 | 253 |
embryonic cell | 1.16e-25 | 250 |
mesodermal cell | 1.92e-12 | 121 |
lining cell | 5.20e-11 | 58 |
barrier cell | 5.20e-11 | 58 |
epithelial cell of nephron | 3.40e-10 | 15 |
meso-epithelial cell | 1.46e-09 | 45 |
squamous epithelial cell | 5.13e-09 | 63 |
endothelial cell | 5.60e-09 | 36 |
kidney cell | 9.72e-09 | 17 |
kidney epithelial cell | 9.72e-09 | 17 |
kidney cortical cell | 1.24e-08 | 12 |
renal cortical epithelial cell | 1.24e-08 | 12 |
ectodermal cell | 5.80e-08 | 72 |
blood vessel endothelial cell | 2.66e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.66e-07 | 18 |
kidney tubule cell | 2.72e-07 | 10 |
nephron tubule epithelial cell | 2.72e-07 | 10 |
endothelial cell of vascular tree | 4.54e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 3.40e-10 | 15 |
renal tubule | 3.40e-10 | 15 |
nephron tubule | 3.40e-10 | 15 |
nephron | 3.40e-10 | 15 |
uriniferous tubule | 3.40e-10 | 15 |
nephrogenic mesenchyme | 3.40e-10 | 15 |
epithelial tube | 4.27e-09 | 117 |
excretory tube | 5.92e-09 | 16 |
kidney epithelium | 5.92e-09 | 16 |
cortex of kidney | 1.24e-08 | 12 |
renal parenchyma | 1.24e-08 | 12 |
parenchyma | 1.48e-08 | 15 |
unilaminar epithelium | 4.05e-08 | 148 |
kidney | 6.40e-08 | 26 |
kidney mesenchyme | 6.40e-08 | 26 |
upper urinary tract | 6.40e-08 | 26 |
kidney rudiment | 6.40e-08 | 26 |
kidney field | 6.40e-08 | 26 |
trunk | 9.20e-08 | 199 |
simple squamous epithelium | 1.56e-07 | 22 |
segment of respiratory tract | 2.33e-07 | 47 |
blood vessel endothelium | 2.66e-07 | 18 |
endothelium | 2.66e-07 | 18 |
cardiovascular system endothelium | 2.66e-07 | 18 |
nephron tubule epithelium | 2.72e-07 | 10 |
cortex | 2.83e-07 | 15 |
squamous epithelium | 3.62e-07 | 25 |
cell layer | 4.09e-07 | 309 |
urinary system structure | 4.52e-07 | 47 |
vasculature | 8.49e-07 | 78 |
vascular system | 8.49e-07 | 78 |
subdivision of trunk | 8.53e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.23e-12 | 235 |
disease of cellular proliferation | 1.20e-11 | 239 |
hematologic cancer | 4.26e-11 | 51 |
immune system cancer | 4.26e-11 | 51 |
leukemia | 2.88e-09 | 39 |
organ system cancer | 9.63e-08 | 137 |
myeloid leukemia | 3.32e-07 | 31 |