FFCP PHASE1:Hg19::chr6:12365655..12365659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:12365655..12365659,+ | |||
|description=CAGE_peak_at_chr6:12365655..12365659,+ | |description=CAGE_peak_at_chr6:12365655..12365659,+ | ||
|id=chr6:12365655..12365659,+ | |id=chr6:12365655..12365659,+ | ||
|ontology_enrichment_celltype=CL:0002393!3.68e-09!9;CL:0002397!3.68e-09!9;CL:0000066!1.72e-08!254;CL:1000497!3.16e-08!18;CL:0002518!3.16e-08!18 | |ontology_enrichment_celltype=CL:0002393!3.68e-09!9;CL:0002397!3.68e-09!9;CL:0000066!1.72e-08!254;CL:1000497!3.16e-08!18;CL:0002518!3.16e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.22e-08;17!CL:0002518;3.22e-08;17!CL:0002393;5.72e-07;6!CL:0002397;5.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.57e-10,253;CL:1000497,2.92e-08,17;CL:0002518,2.92e-08,17;CL:0002393,1.48e-07,9;CL:0002397,1.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.26e-09!25;DOID:305!8.22e-08!106 | |ontology_enrichment_disease=DOID:299!2.26e-09!25;DOID:305!8.22e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:299;3.17e-18;25!DOID:4929;2.33e-09;2!DOID:4468;4.59e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.57e-18,25;DOID:305,9.30e-14,106;DOID:0050687,6.00e-10,143;DOID:4468,2.99e-09,2;DOID:4929,3.12e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;4.97e-10;4!UBERON:0004907;4.18e-08;5!UBERON:0002113;1.81e-07;24!UBERON:0011143;1.81e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.29e-10,4;UBERON:0004907,3.02e-08,5;UBERON:0005172,5.63e-07,54;UBERON:0005173,5.63e-07,54;UBERON:0002394,5.97e-07,6;UBERON:0003928,5.97e-07,6;UBERON:0002113,8.48e-07,26;UBERON:0003918,8.48e-07,26;UBERON:0011143,8.48e-07,26;UBERON:0005095,8.48e-07,26;UBERON:0007687,8.48e-07,26 | |||
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| ||
|short_description=p@chr6:12365655..12365659,+ | |short_description=p@chr6:12365655..12365659,+ | ||
}} | }} |
Latest revision as of 19:00, 30 July 2015
Short description: | p@chr6:12365655..12365659, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12365655..12365659, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.57e-10 | 253 |
kidney cell | 2.92e-08 | 17 |
kidney epithelial cell | 2.92e-08 | 17 |
intermediate monocyte | 1.48e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.29e-10 | 4 |
lower digestive tract | 3.02e-08 | 5 |
abdomen element | 5.63e-07 | 54 |
abdominal segment element | 5.63e-07 | 54 |
bile duct | 5.97e-07 | 6 |
digestive system duct | 5.97e-07 | 6 |
kidney | 8.48e-07 | 26 |
kidney mesenchyme | 8.48e-07 | 26 |
upper urinary tract | 8.48e-07 | 26 |
kidney rudiment | 8.48e-07 | 26 |
kidney field | 8.48e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.57e-18 | 25 |
carcinoma | 9.30e-14 | 106 |
cell type cancer | 6.00e-10 | 143 |
clear cell adenocarcinoma | 2.99e-09 | 2 |
tubular adenocarcinoma | 3.12e-09 | 2 |