FFCP PHASE1:Hg19::chr6:158507759..158507777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8871 | |EntrezGene=8871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11504 | |HGNC=11504 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-109bp_to_uc010kjp.1_5end | |association_with_transcript=-109bp_to_uc010kjp.1_5end | ||
|cluster_id=chr6:158507759..158507777,+ | |||
|description=CAGE_peak_14_at_SYNJ2_5end | |description=CAGE_peak_14_at_SYNJ2_5end | ||
|id=chr6:158507759..158507777,+ | |id=chr6:158507759..158507777,+ | ||
|ontology_enrichment_celltype=CL:0000842!5.32e-12!3;CL:0000224!4.07e-09!4;CL:0002602!5.19e-09!2 | |ontology_enrichment_celltype=CL:0000842!5.32e-12!3;CL:0000224!4.07e-09!4;CL:0002602!5.19e-09!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.23e-07,108;CL:0000049,3.23e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.48e-12;2 | |||
|ontology_enrichment_disease=DOID:8692!2.10e-09!31;DOID:1240!1.10e-08!39;DOID:2531!1.58e-07!51;DOID:0060083!1.58e-07!51 | |ontology_enrichment_disease=DOID:8692!2.10e-09!31;DOID:1240!1.10e-08!39;DOID:2531!1.58e-07!51;DOID:0060083!1.58e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.76e-24;31!DOID:225;1.87e-23;1!DOID:1240;1.03e-15;39!DOID:74;1.96e-12;2!DOID:2531;1.77e-09;51!DOID:0060083;1.77e-09;51!DOID:1287;7.48e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.34e-25,31;DOID:225,1.67e-23,1;DOID:1240,3.45e-20,39;DOID:2531,1.84e-15,51;DOID:0060083,1.84e-15,51;DOID:74,1.85e-12,2;DOID:1287,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003586!3.54e-13!5;UBERON:0006947!4.83e-13!3;UBERON:0004054!4.83e-13!3;UBERON:0005904!6.89e-10!4;UBERON:0009568!5.19e-09!2;UBERON:0002216!5.19e-09!2;UBERON:0002209!5.19e-09!2;UBERON:0002213!5.19e-09!2;UBERON:0004267!5.19e-09!2;UBERON:0006444!5.19e-09!2;UBERON:0001995!5.19e-09!2;UBERON:0004715!5.19e-09!2;UBERON:0001468!5.19e-09!2;UBERON:0001130!5.19e-09!2;UBERON:0001066!5.19e-09!2;UBERON:0000341!1.44e-08!2;UBERON:0002113!2.82e-08!27;UBERON:0003918!2.82e-08!27;UBERON:0005095!2.82e-08!27;UBERON:0007687!2.82e-08!27;UBERON:0000080!1.81e-07!18;UBERON:0002120!1.81e-07!18;UBERON:0004875!1.81e-07!18;UBERON:0005721!1.81e-07!18;UBERON:0005754!1.81e-07!18;UBERON:0007297!1.81e-07!18;UBERON:0000489!8.85e-07!32 | |ontology_enrichment_uberon=UBERON:0003586!3.54e-13!5;UBERON:0006947!4.83e-13!3;UBERON:0004054!4.83e-13!3;UBERON:0005904!6.89e-10!4;UBERON:0009568!5.19e-09!2;UBERON:0002216!5.19e-09!2;UBERON:0002209!5.19e-09!2;UBERON:0002213!5.19e-09!2;UBERON:0004267!5.19e-09!2;UBERON:0006444!5.19e-09!2;UBERON:0001995!5.19e-09!2;UBERON:0004715!5.19e-09!2;UBERON:0001468!5.19e-09!2;UBERON:0001130!5.19e-09!2;UBERON:0001066!5.19e-09!2;UBERON:0000341!1.44e-08!2;UBERON:0002113!2.82e-08!27;UBERON:0003918!2.82e-08!27;UBERON:0005095!2.82e-08!27;UBERON:0007687!2.82e-08!27;UBERON:0000080!1.81e-07!18;UBERON:0002120!1.81e-07!18;UBERON:0004875!1.81e-07!18;UBERON:0005721!1.81e-07!18;UBERON:0005754!1.81e-07!18;UBERON:0007297!1.81e-07!18;UBERON:0000489!8.85e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.07e-23;1!UBERON:0006947;8.31e-09;3!UBERON:0004054;8.31e-09;3!UBERON:0005904;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.07e-23,1;UBERON:0006947,8.31e-09,3;UBERON:0004054,8.31e-09,3;UBERON:0005904,6.50e-07,4 | |||
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| ||
|short_description=p14@SYNJ2 | |short_description=p14@SYNJ2 | ||
}} | }} |
Latest revision as of 11:34, 16 September 2015
Short description: | p14@SYNJ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SYNJ2_5end |
Coexpression cluster: | NA |
Association with transcript: | -109bp_to_uc010kjp.1_5end |
EntrezGene: | SYNJ2 |
HGNC: | 11504 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.23e-07 | 108 |
common myeloid progenitor | 3.23e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.07e-23 | 1 |
male genital duct | 8.31e-09 | 3 |
internal male genitalia | 8.31e-09 | 3 |
duct of male reproductive system | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.34e-25 | 31 |
syndrome | 1.67e-23 | 1 |
leukemia | 3.45e-20 | 39 |
hematologic cancer | 1.84e-15 | 51 |
immune system cancer | 1.84e-15 | 51 |
hematopoietic system disease | 1.85e-12 | 2 |
cardiovascular system disease | 7.27e-07 | 4 |