FFCP PHASE1:Hg19::chr16:49315765..49315790,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:49315765..49315790,-
|short_description=p3@CBLN1
|description=CAGE_peak_3_at_CBLN1_5end
|association_with_transcript=-23bp_to_ENST00000219197,NM_004352_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=869 | |EntrezGene=869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1543 | |HGNC=1543 | ||
|TSSclassifier=strong | |||
|UniProt=P23435 | |UniProt=P23435 | ||
|association_with_transcript=-23bp_to_ENST00000219197,NM_004352_5end | |||
|cluster_id=chr16:49315765..49315790,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_CBLN1_5end | |||
|id=chr16:49315765..49315790,- | |||
|ontology_enrichment_celltype=CL:0002319!2.97e-09!25;CL:0000047!8.15e-09!8;CL:0000133!4.00e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.65e-18;25!CL:0000047;8.22e-17;2!CL:0000540;1.83e-12;6!CL:0000404;1.83e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.18e-24,8;CL:0002319,1.20e-17,25;CL:0000540,1.95e-12,6;CL:0000031,1.95e-12,6;CL:0000404,1.95e-12,6;CL:0000133,3.36e-09,59;CL:0000221,2.36e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.44e-26;3!CL:0000031;1.83e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004733;5.31e-24;12!UBERON:0002028;5.31e-24;12!UBERON:0002680;1.12e-22;9!UBERON:0001895;1.12e-22;9!UBERON:0004732;4.00e-22;13!UBERON:0002037;3.20e-13;6!UBERON:0001016;5.49e-13;83!UBERON:0002298;1.83e-12;6!UBERON:0000988;1.59e-11;3!UBERON:0001017;8.61e-10;75!UBERON:0000073;4.71e-09;53!UBERON:0002616;4.71e-09;53!UBERON:0000955;3.16e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.46e-28,89;UBERON:0001017,5.39e-28,81;UBERON:0004733,4.64e-24,12;UBERON:0002028,4.64e-24,12;UBERON:0007277,4.64e-24,12;UBERON:0002680,1.41e-22,9;UBERON:0001895,1.41e-22,9;UBERON:0010092,1.41e-22,9;UBERON:0004732,3.53e-22,13;UBERON:0003076,3.63e-19,15;UBERON:0003057,3.63e-19,15;UBERON:0004121,6.10e-15,171;UBERON:0000924,6.10e-15,171;UBERON:0006601,6.10e-15,171;UBERON:0000955,1.70e-14,68;UBERON:0006238,1.70e-14,68;UBERON:0000073,2.35e-13,53;UBERON:0002616,2.35e-13,53;UBERON:0002037,3.20e-13,6;UBERON:0006215,3.20e-13,6;UBERON:0001049,1.44e-12,56;UBERON:0005068,1.44e-12,56;UBERON:0006241,1.44e-12,56;UBERON:0007135,1.44e-12,56;UBERON:0002298,1.60e-12,6;UBERON:0011216,4.96e-12,223;UBERON:0000988,2.08e-11,3;UBERON:0003075,7.09e-10,82;UBERON:0007284,7.09e-10,82;UBERON:0002346,2.45e-09,86;UBERON:0010371,6.32e-09,104 | |||
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| ||
|short_description=p3@CBLN1 | |||
}} | }} |
Latest revision as of 19:40, 16 September 2015
Short description: | p3@CBLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CBLN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -23bp_to_ENST00000219197, NM_004352_5end |
EntrezGene: | CBLN1 |
HGNC: | 1543 |
UniProt: | P23435 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.18e-24 | 8 |
neural cell | 1.20e-17 | 25 |
neuron | 1.95e-12 | 6 |
neuroblast | 1.95e-12 | 6 |
electrically signaling cell | 1.95e-12 | 6 |
neurectodermal cell | 3.36e-09 | 59 |
ectodermal cell | 2.36e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.46e-28 | 89 |
central nervous system | 5.39e-28 | 81 |
segmental subdivision of hindbrain | 4.64e-24 | 12 |
hindbrain | 4.64e-24 | 12 |
presumptive hindbrain | 4.64e-24 | 12 |
regional part of metencephalon | 1.41e-22 | 9 |
metencephalon | 1.41e-22 | 9 |
future metencephalon | 1.41e-22 | 9 |
segmental subdivision of nervous system | 3.53e-22 | 13 |
posterior neural tube | 3.63e-19 | 15 |
chordal neural plate | 3.63e-19 | 15 |
ectoderm-derived structure | 6.10e-15 | 171 |
ectoderm | 6.10e-15 | 171 |
presumptive ectoderm | 6.10e-15 | 171 |
brain | 1.70e-14 | 68 |
future brain | 1.70e-14 | 68 |
regional part of nervous system | 2.35e-13 | 53 |
regional part of brain | 2.35e-13 | 53 |
cerebellum | 3.20e-13 | 6 |
rhombic lip | 3.20e-13 | 6 |
neural tube | 1.44e-12 | 56 |
neural rod | 1.44e-12 | 56 |
future spinal cord | 1.44e-12 | 56 |
neural keel | 1.44e-12 | 56 |
brainstem | 1.60e-12 | 6 |
organ system subdivision | 4.96e-12 | 223 |
pons | 2.08e-11 | 3 |
neural plate | 7.09e-10 | 82 |
presumptive neural plate | 7.09e-10 | 82 |
neurectoderm | 2.45e-09 | 86 |
ecto-epithelium | 6.32e-09 | 104 |