FFCP PHASE1:Hg19::chr16:55543013..55543047,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:55543013..55543047,+
|short_description=p2@LPCAT2
|description=CAGE_peak_2_at_LPCAT2_5end
|association_with_transcript=100bp_to_NM_017839,uc002eie.3_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54947 | |EntrezGene=54947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26032 | |HGNC=26032 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L5N7 | |UniProt=Q7L5N7 | ||
|association_with_transcript=100bp_to_NM_017839,uc002eie.3_5end | |||
|cluster_id=chr16:55543013..55543047,+ | |||
|coexpression_cluster_id=C3571 | |||
|description=CAGE_peak_2_at_LPCAT2_5end | |||
|id=chr16:55543013..55543047,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.64e-25!76;CL:0000763!6.79e-25!112;CL:0000049!6.79e-25!112;CL:0000839!3.20e-21!70;CL:0000557!3.25e-21!71;CL:0002009!1.02e-18!65;CL:0002194!1.29e-18!63;CL:0000576!1.29e-18!63;CL:0000040!1.29e-18!63;CL:0000559!1.29e-18!63;CL:0002057!5.50e-18!42;CL:0000860!2.19e-15!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.17e-13;39!CL:0000234;6.17e-13;39!CL:0000860;1.35e-12;33!CL:0002057;1.35e-12;33!CL:0000766;4.69e-12;69!CL:0000576;1.20e-10;48!CL:0000763;4.22e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.89e-27,72;CL:0000763,4.28e-26,108;CL:0000049,4.28e-26,108;CL:0000839,5.59e-23,66;CL:0000557,5.97e-23,67;CL:0000473,6.89e-21,48;CL:0000234,6.89e-21,48;CL:0002009,2.18e-20,61;CL:0002194,2.54e-20,59;CL:0000576,2.54e-20,59;CL:0000040,2.54e-20,59;CL:0000559,2.54e-20,59;CL:0000860,4.11e-18,42;CL:0002057,4.11e-18,42 | |||
|ontology_enrichment_development_v019=CL:0002057;3.44e-13;42!CL:0000049;5.92e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.38e-24!216;UBERON:0002371!5.57e-18!80;UBERON:0002390!1.88e-16!102;UBERON:0003061!1.88e-16!102;UBERON:0000467!2.55e-16!625;UBERON:0000480!5.06e-16!626;UBERON:0002193!7.75e-16!112;UBERON:0001474!1.67e-14!86;UBERON:0000468!1.44e-13!659;UBERON:0004765!4.89e-13!101;UBERON:0001434!4.89e-13!101;UBERON:0002204!1.73e-12!167;UBERON:0002405!5.82e-11!115;UBERON:0004872!2.48e-10!84;UBERON:0001637!3.83e-10!42;UBERON:0003509!3.83e-10!42;UBERON:0004572!3.83e-10!42;UBERON:0001981!4.20e-10!60;UBERON:0007500!4.20e-10!60;UBERON:0004537!4.20e-10!60;UBERON:0006965!4.20e-10!60;UBERON:0002050!1.60e-09!605;UBERON:0005423!1.60e-09!605;UBERON:0004535!1.60e-09!110;UBERON:0000923!1.63e-09!604;UBERON:0005291!1.63e-09!604;UBERON:0006598!1.63e-09!604;UBERON:0002532!1.63e-09!604;UBERON:0000926!2.60e-09!448;UBERON:0004120!2.60e-09!448;UBERON:0006603!2.60e-09!448;UBERON:0001009!3.57e-09!113;UBERON:0000922!4.52e-09!612;UBERON:0000055!5.88e-09!69;UBERON:0004573!2.96e-08!33;UBERON:0004571!2.96e-08!33;UBERON:0000062!8.47e-08!511;UBERON:0002049!4.05e-07!79;UBERON:0007798!4.05e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.30e-08;42!UBERON:0003509;4.30e-08;42!UBERON:0004572;4.30e-08;42!UBERON:0004573;5.53e-08;33!UBERON:0004571;5.53e-08;33!UBERON:0000947;9.53e-07;21!UBERON:0010191;9.53e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.85e-29,203;UBERON:0002371,2.06e-19,76;UBERON:0000926,4.99e-18,315;UBERON:0004120,4.99e-18,315;UBERON:0006603,4.99e-18,315;UBERON:0002390,1.02e-17,98;UBERON:0003061,1.02e-17,98;UBERON:0002193,9.16e-17,108;UBERON:0001474,6.70e-16,82;UBERON:0002405,3.40e-15,93;UBERON:0004765,2.68e-14,90;UBERON:0002050,8.92e-14,564;UBERON:0000923,1.11e-12,560;UBERON:0010316,1.11e-12,560;UBERON:0005291,1.11e-12,560;UBERON:0006598,1.11e-12,560;UBERON:0010317,1.11e-12,560;UBERON:0002532,1.11e-12,560;UBERON:0001434,1.30e-12,100;UBERON:0002204,1.89e-11,167;UBERON:0005423,4.60e-11,581;UBERON:0000922,2.95e-10,592;UBERON:0001637,3.29e-10,42;UBERON:0003509,3.29e-10,42;UBERON:0004572,3.29e-10,42;UBERON:0004872,5.06e-10,83;UBERON:0007500,1.07e-09,59;UBERON:0001981,1.07e-09,59;UBERON:0004537,1.07e-09,59;UBERON:0006965,1.07e-09,59;UBERON:0004535,5.69e-09,109;UBERON:0001009,1.22e-08,112;UBERON:0000055,2.28e-08,68;UBERON:0004573,2.63e-08,33;UBERON:0004571,2.63e-08,33;UBERON:0000947,9.75e-07,21;UBERON:0010191,9.75e-07,21 | |||
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| ||
|short_description=p2@LPCAT2 | |||
}} | }} |
Latest revision as of 00:28, 17 September 2015
Short description: | p2@LPCAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LPCAT2_5end |
Coexpression cluster: | C3571_Neutrophils_Mast_CD14_Eosinophils_Dendritic_thyroid_Prostate |
Association with transcript: | 100bp_to_NM_017839, uc002eie.3_5end |
EntrezGene: | LPCAT2 |
HGNC: | 26032 |
UniProt: | Q7L5N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.89e-27 | 72 |
myeloid cell | 4.28e-26 | 108 |
common myeloid progenitor | 4.28e-26 | 108 |
myeloid lineage restricted progenitor cell | 5.59e-23 | 66 |
granulocyte monocyte progenitor cell | 5.97e-23 | 67 |
defensive cell | 6.89e-21 | 48 |
phagocyte | 6.89e-21 | 48 |
macrophage dendritic cell progenitor | 2.18e-20 | 61 |
monopoietic cell | 2.54e-20 | 59 |
monocyte | 2.54e-20 | 59 |
monoblast | 2.54e-20 | 59 |
promonocyte | 2.54e-20 | 59 |
classical monocyte | 4.11e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.11e-18 | 42 |