FFCP PHASE1:Hg19::chr7:15726243..15726293,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4223 | |EntrezGene=4223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7014 | |HGNC=7014 | ||
|TSSclassifier=strong | |||
|UniProt=P50222 | |UniProt=P50222 | ||
|association_with_transcript=14bp_to_NM_005924,uc003stc.2,uc011jxw.1_5end | |association_with_transcript=14bp_to_NM_005924,uc003stc.2,uc011jxw.1_5end | ||
|cluster_id=chr7:15726243..15726293,- | |||
|coexpression_cluster_id=C1990 | |||
|description=CAGE_peak_2_at_MEOX2_5end | |description=CAGE_peak_2_at_MEOX2_5end | ||
|id=chr7:15726243..15726293,- | |id=chr7:15726243..15726293,- | ||
|ontology_enrichment_celltype=CL:0000327!1.45e-07!14;CL:0000153!4.12e-07!9;CL:0000447!4.12e-07!9;CL:0000188!5.43e-07!9 | |ontology_enrichment_celltype=CL:0000327!1.45e-07!14;CL:0000153!4.12e-07!9;CL:0000447!4.12e-07!9;CL:0000188!5.43e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.84e-09;9!CL:0002138;9.50e-08;6!CL:0000153;1.02e-07;9!CL:0000447;1.02e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.56e-09,9;CL:0005020,7.90e-08,6;CL:0002138,7.90e-08,6;CL:0005022,7.90e-08,6;CL:0000153,9.62e-08,9;CL:0000447,9.62e-08,9 | |||
|ontology_enrichment_development_v019=CL:0005022;9.50e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.93e-24!115 | |ontology_enrichment_uberon=UBERON:0007023!6.93e-24!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.03e-13;16!UBERON:0002036;5.03e-13;16!UBERON:0004905;2.20e-09;8!UBERON:0000982;2.20e-09;8!UBERON:0004770;2.20e-09;8!UBERON:0002465;4.47e-09;10!UBERON:0002405;6.74e-08;27!UBERON:0001473;2.15e-07;8!UBERON:0004536;2.15e-07;8!UBERON:0006558;2.15e-07;8!UBERON:0011135;3.42e-07;5!UBERON:0002216;3.42e-07;5!UBERON:0011134;3.42e-07;5!UBERON:0002209;3.42e-07;5!UBERON:0002213;3.42e-07;5!UBERON:0007844;3.42e-07;5!UBERON:0011138;3.42e-07;5!UBERON:0001130;3.42e-07;5!UBERON:0001066;3.42e-07;5!UBERON:0001468;3.42e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.71e-12,114;UBERON:0004905,2.15e-09,8;UBERON:0000982,2.15e-09,8;UBERON:0004770,2.15e-09,8;UBERON:0002465,3.99e-09,10;UBERON:0001473,1.83e-07,8;UBERON:0004536,1.83e-07,8;UBERON:0006558,1.83e-07,8;UBERON:0011135,3.59e-07,5;UBERON:0002216,3.59e-07,5;UBERON:0011134,3.59e-07,5;UBERON:0002209,3.59e-07,5;UBERON:0002213,3.59e-07,5;UBERON:0005856,3.59e-07,5;UBERON:0005866,3.59e-07,5;UBERON:0005863,3.59e-07,5;UBERON:0007844,3.59e-07,5;UBERON:0011138,3.59e-07,5;UBERON:0001130,3.59e-07,5;UBERON:0001066,3.59e-07,5;UBERON:0001468,3.59e-07,5 | |||
|phase1_expression=1.45342703416445,2.5692062866918,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,6.06455129504228,4.63956326019082,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.458480434487708,0.410502947249729,1.25937250101887,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39741796199872,7.52006865953834,3.0417768981773,1.5905718941022,0.973269740605272,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5723396235144,21.3459757612026,33.1373406637024,1.61131726843659,1.52054421143703,8.05404789908959,34.1926664721658,0,15.4488529931458,16.8397029469627,13.625989138482,0,0,0.732806975721629,0,0,0,6.95760732373446,0.12663051166458,0,0.860509862246441,1.06400514659507,1.12135520028461,0,0.24666754841716,3.11211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.587172493218824,2.10434827678571,1.96631129383148,0,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,4.55080680969013,0,0.673344455816265,1.25118519871964,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,2.06112432036503,1.30281799432113,0,0,0.757301322732344,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,1.58803092537181,2.77791307545966,2.66355813128438,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.829312462163088,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0.784917590417525,0.43596006883328,0.4400297149257,0,7.15312891703765,3.381211010224,0,0,1.02882949704857,2.83698264046557,0.532844358032199,0,0,0,2.93162565864362,0,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,3.90909528002464,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4591279566116,31.5107428267597,6.51036056879365,0,0,0,0,1.20378439891088,0,4.1389228517002,0.664225598535437,2.39679919104214,0.781952530212746,1.56640925970192,1.37257369524342,0,0,0,0,1.66435439510497,0.604780586659361,1.98486246255021,1.84154367945675,1.68396056659844,0,1.53512174720011,0.321707842287215,1.48418066444991,0.771048469013278,0.532685175939381,2.54594183642808,0,2.32420756919918,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0.863663664408557,4.62681758070868,0,0,0,0,0,0,0,0,0,0,9.58281408323817,0,0,1.14853107599234,0,0,6.86362099874066,10.3212573466812,7.98219108575874,11.7161086611851,15.3610950161631,19.7222703723351,6.98858344812027,11.1290044558422,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0.949138274156178,0.190630193923825,1.79128453917934,1.28381696410176,0,0,2.51821440616641,0,0.706874414074119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0,0,0,2.11107635297664,3.62224382255892,0,0,0,0,0,9.97924288233859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,43.9524537815682,18.9322413929241,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,9.96239941255349,6.63081397274754,0,0,0,0,0,0,0,10.1602707806042,0,13.3364388173564,0,0.278304294485554,0,0,0,21.7499872630438,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,5.54041861227339,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,4.86516604768365,6.72133159426988,0,0,0,0.269604531922708,19.2618635351709,0,0,0,0,2.36750641709634,3.62972148145992,0,9.9834795813011,0,0,0,0,0,0,0,0,0,0,0,10.4836000945218,0,0,0,0,6.9832091871662,164.15639564619,2.25980740780532,0,0,0.696418755514666,0,0.0801588202515337,4.0556069000477,0,0,21.5328800791921,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,14.5226848661572,15.8120692568062,6.46085722119133,2.99518500748487,4.72148652950228,7.14148663813992,18.8113722962834,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.236417121897595,1.52118305591495,0,0,0,12.8645158747206,10.5934715258469,0,0,0,0,0,0,0,0,0.879313402068495,0,0.517131825446202,0.13223260174269,0,0,11.1058909070402,87.5627979405139,10.7702154390271,2.48083010905975,0,0,0,3.80812462358632,5.013797880454,0.612691153526923,2.95085367638824,0,0,0,0,0.573409195690071,0.887432412294818,1.1177352529449,0,0,0,0,0,0,0,1.04478362020812,0,0.554805861502613,6.81850818990321,4.27665432979378,1.77962244319307,0,0.453692771289717,1.39893480524502,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21130980883865,9.42898568544573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44370825881442,0,0.622077260032973,0,0,0,0,0,0,0,0,2.22603045457393,0,2.40171224485641,0,0,0.192687675289379,0,0,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,4.66304035765395,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,1.64477330057155,16.871180065236,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,22.0868901704971,0,0,0.40781839786099,0.263091094251396,0,0,5.25903722098444,0,0,7.30526976407596,0,0,0.571812353413251,0,5.23086414156564,7.12818916440576,0,0,0,0,0.860454717640555,0,0,2.54032230114557,0,0,0,0,0,0,20.0702939528247,13.2435020844559,22.0364741954258,14.085618798715,0,0,0.356760272332706,0.5647304101948,0,5.58562521196692,0.231522474323834,0.874238242015829,7.99539403814589,4.4126697915703,0.235676547101626,2.94462700672418,1.18818560130834,3.3812458206672,6.28730324344923,0.469919589899268,0.580120991762195,0,0,0,0,4.3820183294791,6.42220996766357,0.286679166302903,1.89325874631822,0.203974470572744,0,14.2837246939158,33.1075566168409,14.7896201162054,26.8228468516749,0,0,0,0,0,0,0,9.54811597549817,0.803892390468535,0,0.20686599172379,16.4190166063755,9.52257725854961,0.710478008196067,6.08332200099407,0.672791175483681,3.6278880218554,6.06351566874658,15.2401723527873,10.2669990325584,4.17582728690443,7.96116479858707,6.98586748746628,0,0,0,0,2.34640942403454,9.65707409044645,2.84827324821017,16.6439193546378,19.1210103911475,0 | |phase1_expression=1.45342703416445,2.5692062866918,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,6.06455129504228,4.63956326019082,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.458480434487708,0.410502947249729,1.25937250101887,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39741796199872,7.52006865953834,3.0417768981773,1.5905718941022,0.973269740605272,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5723396235144,21.3459757612026,33.1373406637024,1.61131726843659,1.52054421143703,8.05404789908959,34.1926664721658,0,15.4488529931458,16.8397029469627,13.625989138482,0,0,0.732806975721629,0,0,0,6.95760732373446,0.12663051166458,0,0.860509862246441,1.06400514659507,1.12135520028461,0,0.24666754841716,3.11211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.587172493218824,2.10434827678571,1.96631129383148,0,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,4.55080680969013,0,0.673344455816265,1.25118519871964,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,2.06112432036503,1.30281799432113,0,0,0.757301322732344,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,1.58803092537181,2.77791307545966,2.66355813128438,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.829312462163088,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0.784917590417525,0.43596006883328,0.4400297149257,0,7.15312891703765,3.381211010224,0,0,1.02882949704857,2.83698264046557,0.532844358032199,0,0,0,2.93162565864362,0,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,3.90909528002464,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4591279566116,31.5107428267597,6.51036056879365,0,0,0,0,1.20378439891088,0,4.1389228517002,0.664225598535437,2.39679919104214,0.781952530212746,1.56640925970192,1.37257369524342,0,0,0,0,1.66435439510497,0.604780586659361,1.98486246255021,1.84154367945675,1.68396056659844,0,1.53512174720011,0.321707842287215,1.48418066444991,0.771048469013278,0.532685175939381,2.54594183642808,0,2.32420756919918,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0.863663664408557,4.62681758070868,0,0,0,0,0,0,0,0,0,0,9.58281408323817,0,0,1.14853107599234,0,0,6.86362099874066,10.3212573466812,7.98219108575874,11.7161086611851,15.3610950161631,19.7222703723351,6.98858344812027,11.1290044558422,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0.949138274156178,0.190630193923825,1.79128453917934,1.28381696410176,0,0,2.51821440616641,0,0.706874414074119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0,0,0,2.11107635297664,3.62224382255892,0,0,0,0,0,9.97924288233859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,43.9524537815682,18.9322413929241,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,9.96239941255349,6.63081397274754,0,0,0,0,0,0,0,10.1602707806042,0,13.3364388173564,0,0.278304294485554,0,0,0,21.7499872630438,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,5.54041861227339,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,4.86516604768365,6.72133159426988,0,0,0,0.269604531922708,19.2618635351709,0,0,0,0,2.36750641709634,3.62972148145992,0,9.9834795813011,0,0,0,0,0,0,0,0,0,0,0,10.4836000945218,0,0,0,0,6.9832091871662,164.15639564619,2.25980740780532,0,0,0.696418755514666,0,0.0801588202515337,4.0556069000477,0,0,21.5328800791921,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,14.5226848661572,15.8120692568062,6.46085722119133,2.99518500748487,4.72148652950228,7.14148663813992,18.8113722962834,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.236417121897595,1.52118305591495,0,0,0,12.8645158747206,10.5934715258469,0,0,0,0,0,0,0,0,0.879313402068495,0,0.517131825446202,0.13223260174269,0,0,11.1058909070402,87.5627979405139,10.7702154390271,2.48083010905975,0,0,0,3.80812462358632,5.013797880454,0.612691153526923,2.95085367638824,0,0,0,0,0.573409195690071,0.887432412294818,1.1177352529449,0,0,0,0,0,0,0,1.04478362020812,0,0.554805861502613,6.81850818990321,4.27665432979378,1.77962244319307,0,0.453692771289717,1.39893480524502,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21130980883865,9.42898568544573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44370825881442,0,0.622077260032973,0,0,0,0,0,0,0,0,2.22603045457393,0,2.40171224485641,0,0,0.192687675289379,0,0,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,4.66304035765395,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,1.64477330057155,16.871180065236,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,22.0868901704971,0,0,0.40781839786099,0.263091094251396,0,0,5.25903722098444,0,0,7.30526976407596,0,0,0.571812353413251,0,5.23086414156564,7.12818916440576,0,0,0,0,0.860454717640555,0,0,2.54032230114557,0,0,0,0,0,0,20.0702939528247,13.2435020844559,22.0364741954258,14.085618798715,0,0,0.356760272332706,0.5647304101948,0,5.58562521196692,0.231522474323834,0.874238242015829,7.99539403814589,4.4126697915703,0.235676547101626,2.94462700672418,1.18818560130834,3.3812458206672,6.28730324344923,0.469919589899268,0.580120991762195,0,0,0,0,4.3820183294791,6.42220996766357,0.286679166302903,1.89325874631822,0.203974470572744,0,14.2837246939158,33.1075566168409,14.7896201162054,26.8228468516749,0,0,0,0,0,0,0,9.54811597549817,0.803892390468535,0,0.20686599172379,16.4190166063755,9.52257725854961,0.710478008196067,6.08332200099407,0.672791175483681,3.6278880218554,6.06351566874658,15.2401723527873,10.2669990325584,4.17582728690443,7.96116479858707,6.98586748746628,0,0,0,0,2.34640942403454,9.65707409044645,2.84827324821017,16.6439193546378,19.1210103911475,0 | ||
|short_description=p2@MEOX2 | |short_description=p2@MEOX2 | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p2@MEOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEOX2_5end |
Coexpression cluster: | C1990_extraskeletal_lung_tenocyte_adipose_Nucleus_Endothelial_adrenal |
Association with transcript: | 14bp_to_NM_005924, uc003stc.2, uc011jxw.1_5end |
EntrezGene: | MEOX2 |
HGNC: | 7014 |
UniProt: | P50222 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.56e-09 | 9 |
lymphangioblast | 7.90e-08 | 6 |
endothelial cell of lymphatic vessel | 7.90e-08 | 6 |
vascular lymphangioblast | 7.90e-08 | 6 |
GAG secreting cell | 9.62e-08 | 9 |
carbohydrate secreting cell | 9.62e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.71e-12 | 114 |
articulation | 2.15e-09 | 8 |
skeletal joint | 2.15e-09 | 8 |
articular system | 2.15e-09 | 8 |
lymphoid system | 3.99e-09 | 10 |
lymphatic vessel | 1.83e-07 | 8 |
lymph vasculature | 1.83e-07 | 8 |
lymphatic part of lymphoid system | 1.83e-07 | 8 |
intervertebral cartilage | 3.59e-07 | 5 |
symphysis | 3.59e-07 | 5 |
nonsynovial joint | 3.59e-07 | 5 |
fibrous joint | 3.59e-07 | 5 |
cartilaginous joint | 3.59e-07 | 5 |
developing mesenchymal condensation | 3.59e-07 | 5 |
pre-cartilage condensation | 3.59e-07 | 5 |
cartilaginous condensation | 3.59e-07 | 5 |
cartilage element | 3.59e-07 | 5 |
post-cranial axial skeletal system | 3.59e-07 | 5 |
vertebral column | 3.59e-07 | 5 |
intervertebral disk | 3.59e-07 | 5 |
intervertebral joint | 3.59e-07 | 5 |